Commit Graph

51 Commits

Author SHA1 Message Date
Boyuan Yao
7a58dc5ad2
Update metainfo patch branch (#2517)
* init

* rename and remove useless func

* basic chunk

* add evoformer

* align evoformer

* add meta

* basic chunk

* basic memory

* finish basic inference memory estimation

* finish memory estimation

* fix bug

* finish memory estimation

* add part of index tracer

* finish basic index tracer

* add doc string

* add doc str

* polish code

* polish code

* update active log

* polish code

* add possible region search

* finish region search loop

* finish chunk define

* support new op

* rename index tracer

* finishi codegen on msa

* redesign index tracer, add source and change compute

* pass outproduct mean

* code format

* code format

* work with outerproductmean and msa

* code style

* code style

* code style

* code style

* change threshold

* support check_index_duplicate

* support index dupilictae and update loop

* support output

* update memory estimate

* optimise search

* fix layernorm

* move flow tracer

* refactor flow tracer

* format code

* refactor flow search

* code style

* adapt codegen to prepose node

* code style

* remove abandoned function

* remove flow tracer

* code style

* code style

* reorder nodes

* finish node reorder

* update run

* code style

* add chunk select class

* add chunk select

* code style

* add chunksize in emit, fix bug in reassgin shape

* code style

* turn off print mem

* add evoformer openfold init

* init openfold

* add benchmark

* add print

* code style

* code style

* init openfold

* update openfold

* align openfold

* use max_mem to control stratge

* update source add

* add reorder in mem estimator

* improve reorder efficeincy

* support ones_like, add prompt if fit mode search fail

* fix a bug in ones like, dont gen chunk if dim size is 1

* fix bug again

* update min memory stratege, reduce mem usage by 30%

* last version of benchmark

* refactor structure

* restruct dir

* update test

* rename

* take apart chunk code gen

* close mem and code print

* code format

* rename ambiguous variable

* seperate flow tracer

* seperate input node dim search

* seperate prepose_nodes

* seperate non chunk input

* seperate reorder

* rename

* ad reorder graph

* seperate trace flow

* code style

* code style

* fix typo

* set benchmark

* rename test

* update codegen test

* Fix state_dict key missing issue of the ZeroDDP (#2363)

* Fix state_dict output for ZeroDDP duplicated parameters

* Rewrite state_dict based on get_static_torch_model

* Modify get_static_torch_model to be compatible with the lower version (ZeroDDP)

* update codegen test

* update codegen test

* add chunk search test

* code style

* add available

* [hotfix] fix gpt gemini example (#2404)

* [hotfix] fix gpt gemini example

* [example] add new assertions

* remove autochunk_available

* [workflow] added nightly release to pypi (#2403)

* add comments

* code style

* add doc for search chunk

* [doc] updated readme regarding pypi installation (#2406)

* add doc for search

* [doc] updated kernel-related optimisers' docstring (#2385)

* [doc] updated kernel-related optimisers' docstring

* polish doc

* rename trace_index to trace_indice

* rename function from index to indice

* rename

* rename in doc

* [polish] polish code for get_static_torch_model (#2405)

* [gemini] polish code

* [testing] remove code

* [gemini] make more robust

* rename

* rename

* remove useless function

* [worfklow] added coverage test (#2399)

* [worfklow] added coverage test

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* add doc for trace indice

* [docker] updated Dockerfile and release workflow (#2410)

* add doc

* update doc

* add available

* change imports

* add test in import

* [workflow] refactored the example check workflow (#2411)

* [workflow] refactored the example check workflow

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* Update parallel_context.py (#2408)

* [hotfix] add DISTPAN argument for benchmark (#2412)

* change the benchmark config file

* change config

* revert config file

* rename distpan to distplan

* [workflow] added precommit check for code consistency (#2401)

* [workflow] added precommit check for code consistency

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* polish code

* adapt new fx

* [workflow] added translation for non-english comments (#2414)

* [setup] refactored setup.py for dependency graph (#2413)

* change import

* update doc

* [workflow] auto comment if precommit check fails (#2417)

* [hotfix] add norm clearing for the overflow step (#2416)

* [examples] adding tflops to PaLM (#2365)

* [workflow]auto comment with test coverage report (#2419)

* [workflow]auto comment with test coverage report

* polish code

* polish yaml

* [doc] added documentation for CI/CD (#2420)

* [doc] added documentation for CI/CD

* polish markdown

* polish markdown

* polish markdown

* [example] removed duplicated stable diffusion example (#2424)

* [zero] add inference mode and its unit test (#2418)

* [workflow] report test coverage even if below threshold (#2431)

* [example] improved the clarity yof the example readme (#2427)

* [example] improved the clarity yof the example readme

* polish workflow

* polish workflow

* polish workflow

* polish workflow

* polish workflow

* polish workflow

* [ddp] add is_ddp_ignored (#2434)

[ddp] rename to is_ddp_ignored

* [workflow] make test coverage report collapsable (#2436)

* [autoparallel] add shard option (#2423)

* [fx] allow native ckpt trace and codegen. (#2438)

* [cli] provided more details if colossalai run fail (#2442)

* [autoparallel] integrate device mesh initialization into autoparallelize (#2393)

* [autoparallel] integrate device mesh initialization into autoparallelize

* add megatron solution

* update gpt autoparallel examples with latest api

* adapt beta value to fit the current computation cost

* [zero] fix state_dict and load_state_dict for ddp ignored parameters (#2443)

* [ddp] add is_ddp_ignored

[ddp] rename to is_ddp_ignored

* [zero] fix state_dict and load_state_dict

* fix bugs

* [zero] update unit test for ZeroDDP

* [example] updated the hybrid parallel tutorial (#2444)

* [example] updated the hybrid parallel tutorial

* polish code

* [zero] add warning for ignored parameters (#2446)

* [example] updated large-batch optimizer tutorial (#2448)

* [example] updated large-batch optimizer tutorial

* polish code

* polish code

* [example] fixed seed error in train_dreambooth_colossalai.py (#2445)

* [workflow] fixed the on-merge condition check (#2452)

* [workflow] automated the compatiblity test (#2453)

* [workflow] automated the compatiblity test

* polish code

* [autoparallel] update binary elementwise handler (#2451)

* [autoparallel] update binary elementwise handler

* polish

* [workflow] automated bdist wheel build (#2459)

* [workflow] automated bdist wheel build

* polish workflow

* polish readme

* polish readme

* Fix False warning in initialize.py (#2456)

* Update initialize.py

* pre-commit run check

* [examples] update autoparallel tutorial demo (#2449)

* [examples] update autoparallel tutorial demo

* add test_ci.sh

* polish

* add conda yaml

* [cli] fixed hostname mismatch error (#2465)

* [example] integrate autoparallel demo with CI (#2466)

* [example] integrate autoparallel demo with CI

* polish code

* polish code

* polish code

* polish code

* [zero] low level optim supports ProcessGroup (#2464)

* [example] update vit ci script (#2469)

* [example] update vit ci script

* [example] update requirements

* [example] update requirements

* [example] integrate seq-parallel tutorial with CI (#2463)

* [zero] polish low level optimizer (#2473)

* polish pp middleware (#2476)

Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>

* [example] update gpt gemini example ci test (#2477)

* [zero] add unit test for low-level zero init (#2474)

* [workflow] fixed the skip condition of  example weekly check workflow (#2481)

* [example] stable diffusion add roadmap

* add dummy test_ci.sh

* [example] stable diffusion add roadmap (#2482)

* [CI] add test_ci.sh for palm, opt and gpt (#2475)

* polish code

* [example] titans for gpt

* polish readme

* remove license

* polish code

* update readme

* [example] titans for gpt (#2484)

* [autoparallel] support origin activation ckpt on autoprallel system (#2468)

* [autochunk] support evoformer tracer (#2485)

support full evoformer tracer, which is a main module of alphafold. previously we just support a simplifed version of it.
1. support some evoformer's op in fx
2. support evoformer test
3. add repos for test code

* [example] fix requirements (#2488)

* [zero] add unit testings for hybrid parallelism  (#2486)

* [hotfix] gpt example titans bug #2493

* polish code and fix dataloader bugs

* [hotfix] gpt example titans bug #2493 (#2494)

* [fx] allow control of ckpt_codegen init (#2498)

* [fx] allow control of ckpt_codegen init

Currently in ColoGraphModule, ActivationCheckpointCodeGen will be set automatically in __init__. But other codegen can't be set if so. 
So I add an arg to control whether to set ActivationCheckpointCodeGen in __init__.

* code style

* [example] dreambooth example

* add test_ci.sh to dreambooth

* [autochunk] support autochunk on evoformer (#2497)

* Revert "Update parallel_context.py (#2408)"

This reverts commit 7d5640b9db.

* add avg partition (#2483)

Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>

* [auto-chunk] support extramsa (#3) (#2504)

* [utils] lazy init. (#2148)

* [utils] lazy init.

* [utils] remove description.

* [utils] complete.

* [utils] finalize.

* [utils] fix names.

* [autochunk] support parsing blocks (#2506)

* [zero] add strict ddp mode (#2508)

* [zero] add strict ddp mode

* [polish] add comments for strict ddp mode

* [zero] fix test error

* [doc] update opt and tutorial links (#2509)

* [workflow] fixed changed file detection (#2515)

Co-authored-by: oahzxl <xuanlei.zhao@gmail.com>
Co-authored-by: eric8607242 <e0928021388@gmail.com>
Co-authored-by: HELSON <c2h214748@gmail.com>
Co-authored-by: Frank Lee <somerlee.9@gmail.com>
Co-authored-by: Haofan Wang <haofanwang.ai@gmail.com>
Co-authored-by: Jiarui Fang <fangjiarui123@gmail.com>
Co-authored-by: ZijianYY <119492445+ZijianYY@users.noreply.github.com>
Co-authored-by: YuliangLiu0306 <72588413+YuliangLiu0306@users.noreply.github.com>
Co-authored-by: Super Daniel <78588128+super-dainiu@users.noreply.github.com>
Co-authored-by: ver217 <lhx0217@gmail.com>
Co-authored-by: Ziyue Jiang <ziyue.jiang97@gmail.com>
Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>
Co-authored-by: oahzxl <43881818+oahzxl@users.noreply.github.com>
Co-authored-by: binmakeswell <binmakeswell@gmail.com>
Co-authored-by: Fazzie-Maqianli <55798671+Fazziekey@users.noreply.github.com>
Co-authored-by: アマデウス <kurisusnowdeng@users.noreply.github.com>
2023-01-27 09:52:21 +08:00
BlueRum
b3f73ce1c8
[Gemini] Update coloinit_ctx to support meta_tensor (#2147) 2022-12-19 22:37:07 +08:00
Jiarui Fang
8e14344ec9
[hotfix] fix a type in ColoInitContext (#2106) 2022-12-09 11:44:39 +08:00
Jiarui Fang
05545bfee9
[ColoTensor] throw error when ColoInitContext meets meta parameter. (#2105) 2022-12-09 11:39:46 +08:00
HELSON
f6178728a0
[gemini] fix init bugs for modules (#2047)
* [gemini] fix init bugs for modules

* fix bugs
2022-11-30 17:06:10 +08:00
Jiarui Fang
31c644027b
[hotfix] hotfix Gemini for no leaf modules bug (#2043) 2022-11-30 14:53:41 +08:00
Jiarui Fang
52c6ad26e0
[ColoTensor] reconfig ColoInitContext, decouple default_pg and default_dist_spec. (#1953) 2022-11-15 16:24:16 +08:00
Jiarui Fang
9f4fb3f28a
[ColoTensor] ColoInitContext initialize parameters in shard mode. (#1937) 2022-11-14 16:05:09 +08:00
Frank Lee
e6ec99d389
[utils] fixed lazy init context (#1867) 2022-11-10 15:17:20 +08:00
Jiarui Fang
3ce4463fe6
[utils] remove lazy_memory_allocate from ColoInitContext (#1844) 2022-11-09 11:50:33 +08:00
HELSON
1468e4bcfc
[zero] add constant placement policy (#1705)
* fixes memory leak when paramter is in fp16 in ZeroDDP init.
* bans chunk releasement in CUDA. Only when a chunk is about to offload, it is allowed to release.
* adds a constant placement policy. With it, users can allocate a reserved caching memory space for parameters.
2022-10-14 17:53:16 +08:00
ver217
a203b709d5
[hotfix] fix init context (#1543)
* fix init context

* fix lazy init ctx
2022-09-06 11:45:08 +08:00
Frank Lee
2cc1175c76
[fx] tested the complete workflow for auto-parallel (#1336)
* [fx] tested the complete workflow for auto-parallel

* polish code

* polish code

* polish code
2022-07-20 10:45:17 +08:00
Frank Lee
250be4d31e
[utils] integrated colotensor with lazy init context (#1324)
* [utils] integrated colotensor with lazy init context

* polish code

* polish code

* polish code
2022-07-15 17:47:12 +08:00
Jiarui Fang
c92f84fcdb
[tensor] distributed checkpointing for parameters (#1240) 2022-07-12 15:51:06 +08:00
Jiarui Fang
9bcd2fd4af
[tensor] a shorter shard and replicate spec (#1245) 2022-07-11 15:51:48 +08:00
Jiarui Fang
3b500984b1
[tensor] fix some unittests (#1234) 2022-07-08 14:18:30 +08:00
Jiarui Fang
f38006ea83
[checkpoint] checkpoint for ColoTensor Model (#1196) 2022-07-06 17:22:03 +08:00
Jiarui Fang
ae7d3f4927
[refactor] move process group from _DistSpec to ColoTensor. (#1203) 2022-07-06 16:15:16 +08:00
YuliangLiu0306
63d2a93878
[context]support arbitary module materialization. (#1193)
* [CLI] add CLI launcher

* Revert "[CLI] add CLI launcher"

This reverts commit df7e6506d4.

* [context]support arbitary module materialization.

* [test]add numerical check for lazy init context.
2022-07-04 10:12:02 +08:00
YuliangLiu0306
2053e138a2
[context]use meta tensor to init model lazily. (#1187)
* [CLI] add CLI launcher

* Revert "[CLI] add CLI launcher"

This reverts commit df7e6506d4.

* [context]use meta tensor to init model lazily.

* polish

* make module with device kwargs bypass the normal init.

* change unit test to adapt updated context.
2022-06-29 21:02:30 +08:00
Jiarui Fang
4b9bba8116
[ColoTensor] rename APIs and add output_replicate to ComputeSpec (#1168) 2022-06-24 13:08:54 +08:00
Frank Lee
f8eec98ff5
[tensor] fixed non-serializable colo parameter during model checkpointing (#1153) 2022-06-22 11:43:38 +08:00
Frank Lee
73ad05fc8c
[zero] added error message to handle on-the-fly import of torch Module class (#1135)
* [zero] added error message to handle on-the-fly import of torch Module class

* polish code
2022-06-20 11:24:27 +08:00
Frank Lee
2b2dc1c86b
[pipeline] refactor the pipeline module (#1087)
* [pipeline] refactor the pipeline module

* polish code
2022-06-10 11:27:38 +08:00
Frank Lee
bad5d4c0a1
[context] support lazy init of module (#1088)
* [context] support lazy init of module

* polish code
2022-06-10 10:09:48 +08:00
Frank Lee
bfdc5ccb7b
[context] maintain the context object in with statement (#1073) 2022-06-07 10:48:45 +08:00
Jiarui Fang
49832b2344
[refactory] add nn.parallel module (#1068) 2022-06-06 15:34:41 +08:00
Jiarui Fang
a00644079e
reorgnize colotensor directory (#1062)
* reorgnize colotensor directory

* polish code
2022-06-03 18:04:22 +08:00
Ziyue Jiang
df9dcbbff6
[Tensor] add hybrid device demo and fix bugs (#1059) 2022-06-03 12:09:49 +08:00
Ziyue Jiang
7c530b9de2
[Tensor] add Parameter inheritance for ColoParameter (#1041)
* add Parameter inheritance for ColoParameter

* remove tricks

* remove tricks

* polish

* polish
2022-05-30 17:23:44 +08:00
Ziyue Jiang
6c5996a56e
[Tensor] add module check and bert test (#1031)
* add Embedding

* Add bert test

* polish

* add check module test

* polish

* polish

* polish

* polish
2022-05-26 18:15:42 +08:00
Ziyue Jiang
32291dd73f
[Tensor] add module handler for linear (#1021)
* add module spec for linear

* polish

* polish

* polish
2022-05-26 11:50:44 +08:00
ver217
007ca0df92
fix colo init context (#1026) 2022-05-25 20:41:58 +08:00
ver217
ad536e308e
[tensor] refactor colo-tensor (#992)
* refactor colo-tensor and update linear op

* polish code

* polish code

* update ops and unit tests

* update unit tests

* polish code

* rename dist_spec module

* polish code

* polish code

* remove unneeded import

* fix pipelinable
2022-05-19 12:44:59 +08:00
Ziyue Jiang
d73c2b1d79
[Tensor] fix init context (#931)
* change torch.Parameter to ColoParameter

* fix post assignment for init context

* polish

* polish
2022-05-11 15:48:12 +08:00
Ziyue Jiang
dfc88b85ea
[Tensor] simplify named param (#928)
* simplify ColoModulize

* simplify ColoModulize

* polish

* polish
2022-05-11 10:54:19 +08:00
YuliangLiu0306
32a45cd7ef
[pipelinable]use pipelinable to support GPT model. (#903)
* [CLI] add CLI launcher

* Revert "[CLI] add CLI launcher"

This reverts commit df7e6506d4.

* [pipelinable]use pipelinable to support GPT model.

* fix a bug caused by ShardedModel

* polish

* fix front func list
2022-05-11 09:23:58 +08:00
Ziyue Jiang
c195d2814c
[Tensor] add from_pretrained support and bert pretrained test (#921)
* add from_pretrained support and test

* polish

* polish

* polish

* polish
2022-05-09 16:11:47 +08:00
Jiarui Fang
ab95ec9aea
[Tensor] init ColoParameter (#914) 2022-05-06 12:57:14 +08:00
Jiarui Fang
d16671da75
[Tensor] initialize the ColoOptimizer (#898)
* [Tensor] activation is an attr of ColoTensor

* [Tensor] add optimizer

* only detach parameters in context

* polish code
2022-04-28 15:23:40 +08:00
Jiarui Fang
676f191532
[Tensor] activation is an attr of ColoTensor (#897) 2022-04-28 14:43:22 +08:00
Jiarui Fang
26c49639d8
[Tensor] overriding paramters() for Module using ColoTensor (#889) 2022-04-27 15:28:59 +08:00
ver217
4df6471f5d
fix import error (#880) 2022-04-26 19:28:40 +08:00
Jiarui Fang
d01d3b8cb0
colo init context add device attr. (#866) 2022-04-25 14:24:26 +08:00
YuliangLiu0306
c6930d8ddf
[pipelinable]use ColoTensor to replace dummy tensor. (#853) 2022-04-24 18:31:22 +08:00
Jiarui Fang
62f059251b
[Tensor] init a tp network training unittest (#849) 2022-04-24 16:43:44 +08:00
ver217
0dea140760
[hotfix] add deconstructor for stateful tensor (#848)
* add deconstructor for stateful tensor

* fix colo init context
2022-04-24 15:03:04 +08:00
YuliangLiu0306
35ea6e1023
[pipelinable]use pipelinable context to initialize non-pipeline model (#816)
* [CLI] add CLI launcher

* Revert "[CLI] add CLI launcher"

This reverts commit df7e6506d4.

* [pipeline]add module lazy init feature to support large model initization.

* [pipeline]add to_layer_list and partition method to support arbitrary non-pp model

* refactor the module structure

* polish

* [pipelinable]add unit test for pipelinable

* polish

* polish

* Fix CodeFactor issues.
2022-04-24 13:03:12 +08:00
Jiarui Fang
8789850eea
Init Conext supports lazy allocate model memory (#842) 2022-04-22 18:03:35 +08:00