mirror of
https://github.com/hpcaitech/ColossalAI.git
synced 2025-08-18 07:57:46 +00:00
* init
* rename and remove useless func
* basic chunk
* add evoformer
* align evoformer
* add meta
* basic chunk
* basic memory
* finish basic inference memory estimation
* finish memory estimation
* fix bug
* finish memory estimation
* add part of index tracer
* finish basic index tracer
* add doc string
* add doc str
* polish code
* polish code
* update active log
* polish code
* add possible region search
* finish region search loop
* finish chunk define
* support new op
* rename index tracer
* finishi codegen on msa
* redesign index tracer, add source and change compute
* pass outproduct mean
* code format
* code format
* work with outerproductmean and msa
* code style
* code style
* code style
* code style
* change threshold
* support check_index_duplicate
* support index dupilictae and update loop
* support output
* update memory estimate
* optimise search
* fix layernorm
* move flow tracer
* refactor flow tracer
* format code
* refactor flow search
* code style
* adapt codegen to prepose node
* code style
* remove abandoned function
* remove flow tracer
* code style
* code style
* reorder nodes
* finish node reorder
* update run
* code style
* add chunk select class
* add chunk select
* code style
* add chunksize in emit, fix bug in reassgin shape
* code style
* turn off print mem
* add evoformer openfold init
* init openfold
* add benchmark
* add print
* code style
* code style
* init openfold
* update openfold
* align openfold
* use max_mem to control stratge
* update source add
* add reorder in mem estimator
* improve reorder efficeincy
* support ones_like, add prompt if fit mode search fail
* fix a bug in ones like, dont gen chunk if dim size is 1
* fix bug again
* update min memory stratege, reduce mem usage by 30%
* last version of benchmark
* refactor structure
* restruct dir
* update test
* rename
* take apart chunk code gen
* close mem and code print
* code format
* rename ambiguous variable
* seperate flow tracer
* seperate input node dim search
* seperate prepose_nodes
* seperate non chunk input
* seperate reorder
* rename
* ad reorder graph
* seperate trace flow
* code style
* code style
* fix typo
* set benchmark
* rename test
* update codegen test
* Fix state_dict key missing issue of the ZeroDDP (#2363)
* Fix state_dict output for ZeroDDP duplicated parameters
* Rewrite state_dict based on get_static_torch_model
* Modify get_static_torch_model to be compatible with the lower version (ZeroDDP)
* update codegen test
* update codegen test
* add chunk search test
* code style
* add available
* [hotfix] fix gpt gemini example (#2404)
* [hotfix] fix gpt gemini example
* [example] add new assertions
* remove autochunk_available
* [workflow] added nightly release to pypi (#2403)
* add comments
* code style
* add doc for search chunk
* [doc] updated readme regarding pypi installation (#2406)
* add doc for search
* [doc] updated kernel-related optimisers' docstring (#2385)
* [doc] updated kernel-related optimisers' docstring
* polish doc
* rename trace_index to trace_indice
* rename function from index to indice
* rename
* rename in doc
* [polish] polish code for get_static_torch_model (#2405)
* [gemini] polish code
* [testing] remove code
* [gemini] make more robust
* rename
* rename
* remove useless function
* [worfklow] added coverage test (#2399)
* [worfklow] added coverage test
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* add doc for trace indice
* [docker] updated Dockerfile and release workflow (#2410)
* add doc
* update doc
* add available
* change imports
* add test in import
* [workflow] refactored the example check workflow (#2411)
* [workflow] refactored the example check workflow
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* Update parallel_context.py (#2408)
* [hotfix] add DISTPAN argument for benchmark (#2412)
* change the benchmark config file
* change config
* revert config file
* rename distpan to distplan
* [workflow] added precommit check for code consistency (#2401)
* [workflow] added precommit check for code consistency
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* adapt new fx
* [workflow] added translation for non-english comments (#2414)
* [setup] refactored setup.py for dependency graph (#2413)
* change import
* update doc
* [workflow] auto comment if precommit check fails (#2417)
* [hotfix] add norm clearing for the overflow step (#2416)
* [examples] adding tflops to PaLM (#2365)
* [workflow]auto comment with test coverage report (#2419)
* [workflow]auto comment with test coverage report
* polish code
* polish yaml
* [doc] added documentation for CI/CD (#2420)
* [doc] added documentation for CI/CD
* polish markdown
* polish markdown
* polish markdown
* [example] removed duplicated stable diffusion example (#2424)
* [zero] add inference mode and its unit test (#2418)
* [workflow] report test coverage even if below threshold (#2431)
* [example] improved the clarity yof the example readme (#2427)
* [example] improved the clarity yof the example readme
* polish workflow
* polish workflow
* polish workflow
* polish workflow
* polish workflow
* polish workflow
* [ddp] add is_ddp_ignored (#2434)
[ddp] rename to is_ddp_ignored
* [workflow] make test coverage report collapsable (#2436)
* [autoparallel] add shard option (#2423)
* [fx] allow native ckpt trace and codegen. (#2438)
* [cli] provided more details if colossalai run fail (#2442)
* [autoparallel] integrate device mesh initialization into autoparallelize (#2393)
* [autoparallel] integrate device mesh initialization into autoparallelize
* add megatron solution
* update gpt autoparallel examples with latest api
* adapt beta value to fit the current computation cost
* [zero] fix state_dict and load_state_dict for ddp ignored parameters (#2443)
* [ddp] add is_ddp_ignored
[ddp] rename to is_ddp_ignored
* [zero] fix state_dict and load_state_dict
* fix bugs
* [zero] update unit test for ZeroDDP
* [example] updated the hybrid parallel tutorial (#2444)
* [example] updated the hybrid parallel tutorial
* polish code
* [zero] add warning for ignored parameters (#2446)
* [example] updated large-batch optimizer tutorial (#2448)
* [example] updated large-batch optimizer tutorial
* polish code
* polish code
* [example] fixed seed error in train_dreambooth_colossalai.py (#2445)
* [workflow] fixed the on-merge condition check (#2452)
* [workflow] automated the compatiblity test (#2453)
* [workflow] automated the compatiblity test
* polish code
* [autoparallel] update binary elementwise handler (#2451)
* [autoparallel] update binary elementwise handler
* polish
* [workflow] automated bdist wheel build (#2459)
* [workflow] automated bdist wheel build
* polish workflow
* polish readme
* polish readme
* Fix False warning in initialize.py (#2456)
* Update initialize.py
* pre-commit run check
* [examples] update autoparallel tutorial demo (#2449)
* [examples] update autoparallel tutorial demo
* add test_ci.sh
* polish
* add conda yaml
* [cli] fixed hostname mismatch error (#2465)
* [example] integrate autoparallel demo with CI (#2466)
* [example] integrate autoparallel demo with CI
* polish code
* polish code
* polish code
* polish code
* [zero] low level optim supports ProcessGroup (#2464)
* [example] update vit ci script (#2469)
* [example] update vit ci script
* [example] update requirements
* [example] update requirements
* [example] integrate seq-parallel tutorial with CI (#2463)
* [zero] polish low level optimizer (#2473)
* polish pp middleware (#2476)
Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>
* [example] update gpt gemini example ci test (#2477)
* [zero] add unit test for low-level zero init (#2474)
* [workflow] fixed the skip condition of example weekly check workflow (#2481)
* [example] stable diffusion add roadmap
* add dummy test_ci.sh
* [example] stable diffusion add roadmap (#2482)
* [CI] add test_ci.sh for palm, opt and gpt (#2475)
* polish code
* [example] titans for gpt
* polish readme
* remove license
* polish code
* update readme
* [example] titans for gpt (#2484)
* [autoparallel] support origin activation ckpt on autoprallel system (#2468)
* [autochunk] support evoformer tracer (#2485)
support full evoformer tracer, which is a main module of alphafold. previously we just support a simplifed version of it.
1. support some evoformer's op in fx
2. support evoformer test
3. add repos for test code
* [example] fix requirements (#2488)
* [zero] add unit testings for hybrid parallelism (#2486)
* [hotfix] gpt example titans bug #2493
* polish code and fix dataloader bugs
* [hotfix] gpt example titans bug #2493 (#2494)
* [fx] allow control of ckpt_codegen init (#2498)
* [fx] allow control of ckpt_codegen init
Currently in ColoGraphModule, ActivationCheckpointCodeGen will be set automatically in __init__. But other codegen can't be set if so.
So I add an arg to control whether to set ActivationCheckpointCodeGen in __init__.
* code style
* [example] dreambooth example
* add test_ci.sh to dreambooth
* [autochunk] support autochunk on evoformer (#2497)
* Revert "Update parallel_context.py (#2408)"
This reverts commit 7d5640b9db
.
* add avg partition (#2483)
Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>
* [auto-chunk] support extramsa (#3) (#2504)
* [utils] lazy init. (#2148)
* [utils] lazy init.
* [utils] remove description.
* [utils] complete.
* [utils] finalize.
* [utils] fix names.
* [autochunk] support parsing blocks (#2506)
* [zero] add strict ddp mode (#2508)
* [zero] add strict ddp mode
* [polish] add comments for strict ddp mode
* [zero] fix test error
* [doc] update opt and tutorial links (#2509)
* [workflow] fixed changed file detection (#2515)
Co-authored-by: oahzxl <xuanlei.zhao@gmail.com>
Co-authored-by: eric8607242 <e0928021388@gmail.com>
Co-authored-by: HELSON <c2h214748@gmail.com>
Co-authored-by: Frank Lee <somerlee.9@gmail.com>
Co-authored-by: Haofan Wang <haofanwang.ai@gmail.com>
Co-authored-by: Jiarui Fang <fangjiarui123@gmail.com>
Co-authored-by: ZijianYY <119492445+ZijianYY@users.noreply.github.com>
Co-authored-by: YuliangLiu0306 <72588413+YuliangLiu0306@users.noreply.github.com>
Co-authored-by: Super Daniel <78588128+super-dainiu@users.noreply.github.com>
Co-authored-by: ver217 <lhx0217@gmail.com>
Co-authored-by: Ziyue Jiang <ziyue.jiang97@gmail.com>
Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>
Co-authored-by: oahzxl <43881818+oahzxl@users.noreply.github.com>
Co-authored-by: binmakeswell <binmakeswell@gmail.com>
Co-authored-by: Fazzie-Maqianli <55798671+Fazziekey@users.noreply.github.com>
Co-authored-by: アマデウス <kurisusnowdeng@users.noreply.github.com>
316 lines
13 KiB
Python
316 lines
13 KiB
Python
import math
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import warnings
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from enum import Enum
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from typing import Any, Dict, Set, Tuple
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import torch
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import torch.distributed as dist
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from torch.nn import Parameter
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from torch.optim import Optimizer
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from colossalai.amp.naive_amp.grad_scaler import DynamicGradScaler
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from colossalai.gemini.chunk import Chunk, ChunkManager
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from colossalai.logging import get_dist_logger
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from colossalai.nn.optimizer import ColossalaiOptimizer, CPUAdam, FusedAdam, HybridAdam
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from colossalai.nn.parallel.data_parallel import ZeroDDP
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from colossalai.utils import disposable, get_current_device, is_ddp_ignored
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_AVAIL_OPTIM_LIST = {FusedAdam, CPUAdam, HybridAdam}
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class OptimState(Enum):
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SCALED = 0
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UNSCALED = 1
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class ZeroOptimizer(ColossalaiOptimizer):
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"""A wrapper for optimizer. ``ZeroDDP`` and ``ZeroOptimizer`` implement Zero Redundancy Optimizer (ZeRO state-3).
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Note:
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You must use ``ZeroDDP`` with ``ZeroOptimizer``.
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Note:
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Make sure you set ``placement_policy`` of ``GeminiManager`` to `"auto"`,
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if you set ``gpu_margin_mem_ratio > 0``.
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Args:
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optim (Optimizer): An Optimizer instance.
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module (ZeroDDP): A ``ZeroDDP`` instance.
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gpu_margin_mem_ratio (float, optional): The ratio of GPU remaining memory (after the first forward-backward)
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which will be used when using hybrid CPU optimizer.
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This argument is meaningless when `placement_policy` of `GeminiManager` is not "auto".
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Defaults to 0.0.
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initial_scale (float, optional): Initial scale used by DynamicGradScaler. Defaults to 2**32.
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min_scale (float, optional): Min scale used by DynamicGradScaler. Defaults to 1.
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growth_factor (float, optional): growth_factor used by DynamicGradScaler. Defaults to 2.
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backoff_factor (float, optional): backoff_factor used by DynamicGradScaler. Defaults to 0.5.
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growth_interval (float, optional): growth_interval used by DynamicGradScaler. Defaults to 1000.
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hysteresis (float, optional): hysteresis used by DynamicGradScaler. Defaults to 2.
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max_scale (int, optional): max_scale used by DynamicGradScaler. Defaults to 2**32.
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"""
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def __init__(self,
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optim: Optimizer,
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module: ZeroDDP,
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gpu_margin_mem_ratio: float = 0.0,
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initial_scale: float = 2**32,
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min_scale: float = 1,
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growth_factor: float = 2,
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backoff_factor: float = 0.5,
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growth_interval: int = 1000,
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hysteresis: int = 2,
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max_scale: float = 2**32,
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clipping_norm: float = 0.0,
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norm_type: float = 2.0,
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**defaults: Any):
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super().__init__(optim)
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assert isinstance(module, ZeroDDP)
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assert type(optim) in _AVAIL_OPTIM_LIST, "you should use the optimizer in the available list"
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self.module = module
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self.gemini_manager = module.gemini_manager
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self.chunk_manager: ChunkManager = self.gemini_manager.chunk_manager
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self.optim_state = OptimState.UNSCALED
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self.param_to_range: Dict[Parameter, Tuple[int, int]] = dict()
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self.param_to_chunk32: Dict[Parameter, Chunk] = dict()
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self.chunk16_set: Set[Chunk] = set()
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self.clipping_flag = clipping_norm > 0.0
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self.max_norm = clipping_norm
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if self.clipping_flag:
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assert norm_type == 2.0, "ZeroOptimizer only supports L2 norm now"
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ddp_param_list = []
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for name, param in module.named_parameters():
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if is_ddp_ignored(param):
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if param.requires_grad:
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warnings.warn(f"Parameter `{name}` is ignored by DDP but requires gradient! "
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"You should handle its optimizer update by yourself!")
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else:
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ddp_param_list.append(param)
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for p, fp32_p in zip(ddp_param_list, module.fp32_params):
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chunk_16 = self.chunk_manager.get_chunk(p)
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if chunk_16 not in self.chunk16_set:
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chunk_16.l2_norm_flag = self.clipping_flag
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self.chunk16_set.add(chunk_16)
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self.__init__optimizer()
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# Grad scaler
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self.grad_scaler = DynamicGradScaler(initial_scale=initial_scale,
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min_scale=min_scale,
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growth_factor=growth_factor,
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backoff_factor=backoff_factor,
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growth_interval=growth_interval,
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hysteresis=hysteresis,
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max_scale=max_scale)
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self._found_overflow: torch.Tensor = torch.zeros(1, dtype=torch.int64, device=get_current_device())
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self._logger = get_dist_logger()
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self.gpu_margin_mem_ratio: float = float(gpu_margin_mem_ratio)
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assert 0.0 <= self.gpu_margin_mem_ratio <= 1.0, f'gpu_margin_mem_ratio must >=0.0 and <=1.0'
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# Only move fp32 shards from CPU to GPU when user allows and inner optimizer is valid
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# Inner optimizer must support optimizing hybrid (CPU and CUDA) tensors,
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# and it must set `num_fp32_shards_per_param` correctly
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self._should_move_fp32_params_h2d: bool = self.gemini_manager.is_cuda_margin_mem_avail and self.gpu_margin_mem_ratio > 0.0 and getattr(
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optim, 'num_fp32_shards_per_param', 0) >= 2
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if self.gpu_margin_mem_ratio > 0.0 and not self.gemini_manager.is_cuda_margin_mem_avail:
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self._logger.warning(f'gpu_margin_mem_ratio is meaningless when placement_policy is not "auto"', ranks=[0])
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self._register_states = disposable(self._register_states_)
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def _set_grad_ptr(self):
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for group in self.param_groups:
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for fake_param in group['params']:
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chunk32 = self.param_to_chunk32[fake_param]
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begin, end = self.param_to_range[fake_param]
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chunk16 = chunk32.paired_chunk
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fake_param.data = chunk16.payload[begin:end]
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fake_param.grad = fake_param.data
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fake_param.data = chunk32.payload[begin:end]
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def _update_fp16_params(self):
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none_tensor = torch.empty([0])
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for group in self.param_groups:
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for fake_param in group['params']:
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assert fake_param.grad is None
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fake_param.data = none_tensor
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for chunk16 in self.chunk16_set:
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chunk16.optim_update()
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def _check_overflow(self):
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# clear previous overflow record
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self._found_overflow.fill_(self.module.overflow_counter)
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# all-reduce across global group
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dist.all_reduce(self._found_overflow)
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return self._found_overflow.item() > 0
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def _clear_global_norm(self) -> None:
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for c16 in self.chunk16_set:
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c16.l2_norm = None
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def _calc_global_norm(self) -> float:
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norm_sqr: float = 0.0
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group_to_norm = dict()
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for c16 in self.chunk16_set:
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assert c16.l2_norm is not None
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if c16.is_gathered:
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norm_sqr += c16.l2_norm
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else:
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# this chunk is sharded, use communication to collect total norm
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if c16.torch_pg not in group_to_norm:
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group_to_norm[c16.torch_pg] = 0.0
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group_to_norm[c16.torch_pg] += c16.l2_norm
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c16.l2_norm = None # clear l2 norm
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comm_buffer = torch.zeros(1, dtype=torch.float, device=get_current_device())
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for group, part_norm in group_to_norm.items():
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comm_buffer.fill_(part_norm)
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dist.all_reduce(comm_buffer, group=group)
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norm_sqr += comm_buffer.item()
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global_norm = math.sqrt(norm_sqr)
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return global_norm
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def _get_combined_scale(self):
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loss_scale = 1
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if self.optim_state == OptimState.SCALED:
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loss_scale = self.loss_scale
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self.optim_state = OptimState.UNSCALED
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combined_scale = loss_scale
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if self.clipping_flag:
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total_norm = self._calc_global_norm()
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clip = ((total_norm / loss_scale) + 1e-6) / self.max_norm
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if clip > 1:
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combined_scale = clip * loss_scale
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if combined_scale == 1:
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return -1
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else:
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return combined_scale
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@property
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def loss_scale(self):
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return self.grad_scaler.scale.item()
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def zero_grad(self, *args, **kwargs):
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self.module.overflow_counter = 0
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return self.optim.zero_grad(set_to_none=True)
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def step(self, *args, **kwargs):
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self._maybe_move_fp32_params()
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self._set_grad_ptr()
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found_inf = self._check_overflow()
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if found_inf:
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self.optim_state = OptimState.UNSCALED # no need to unscale grad
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self.grad_scaler.update(found_inf) # update gradient scaler
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self._logger.info(f'Found overflow. Skip step')
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self._clear_global_norm() # clear recorded norm
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self.zero_grad() # reset all gradients
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self._update_fp16_params()
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return
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# get combined scale. combined scale = loss scale * clipping norm
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# so that gradient = gradient / combined scale
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combined_scale = self._get_combined_scale()
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self.grad_scaler.update(found_inf)
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ret = self.optim.step(div_scale=combined_scale, *args, **kwargs)
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self._register_states()
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self.zero_grad()
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self._update_fp16_params()
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return ret
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def clip_grad_norm(self, model: torch.nn.Module, max_norm: float, norm_type: float = 2.0):
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raise NotImplementedError
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def backward(self, loss: torch.Tensor):
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loss = self.loss_scale * loss
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self.optim_state = OptimState.SCALED
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self.module.backward(loss)
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def backward_by_grad(self, tensor: torch.Tensor, grad: torch.Tensor):
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# This function is called except the last stage of pipeline parallel
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# It receives the scaled grad from the previous rank
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# No need to scale the grad again
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# Need to unscale when optimizing
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self.optim_state = OptimState.SCALED
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self.module.backward_by_grad(tensor, grad)
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def _maybe_move_fp32_params(self):
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if self._should_move_fp32_params_h2d:
|
|
self._should_move_fp32_params_h2d = False
|
|
available_cuda_margin_mem = self.gemini_manager.cuda_margin_mem * self.gpu_margin_mem_ratio
|
|
fp32_params_available_cuda_margin_mem = available_cuda_margin_mem / self.optim.num_fp32_shards_per_param
|
|
fp32_params_used_cuda_margin_mem = 0
|
|
|
|
for group in self.param_groups:
|
|
for fake_param in group['params']:
|
|
chunk32 = self.param_to_chunk32[fake_param]
|
|
chunk16 = chunk32.paired_chunk
|
|
|
|
if chunk32.device_type == 'cuda':
|
|
continue
|
|
|
|
if fp32_params_used_cuda_margin_mem + chunk32.payload_mem < fp32_params_available_cuda_margin_mem:
|
|
self.chunk_manager.move_chunk(chunk32, get_current_device())
|
|
# stores grad now
|
|
self.chunk_manager.move_chunk(chunk16, get_current_device())
|
|
self.module.set_chunk_grad_device(chunk16, get_current_device())
|
|
fp32_params_used_cuda_margin_mem += chunk32.payload_mem
|
|
|
|
for group in self.param_groups:
|
|
for fake_param in group['params']:
|
|
chunk32 = self.param_to_chunk32[fake_param]
|
|
if chunk32.device_type == 'cuda':
|
|
state = self.optim.state[fake_param]
|
|
for k, v in state.items():
|
|
if isinstance(v, torch.Tensor):
|
|
state[k] = v.to(get_current_device())
|
|
|
|
def _register_states_(self):
|
|
for group in self.optim.param_groups:
|
|
for p in group['params']:
|
|
state = self.optim.state[p]
|
|
for val in state.values():
|
|
if isinstance(val, torch.Tensor):
|
|
self.chunk_manager.add_extern_static_tensor(val)
|
|
|
|
def __init__optimizer(self):
|
|
|
|
def get_range_pair(local_chunk: Chunk, local_param: Parameter):
|
|
param_info = local_chunk.tensors_info[local_param]
|
|
if local_chunk.keep_gathered:
|
|
return param_info.offset, param_info.end
|
|
begin = max(0, param_info.offset - local_chunk.shard_begin)
|
|
end = min(local_chunk.shard_size, param_info.end - local_chunk.shard_begin)
|
|
return begin, end
|
|
|
|
for group in self.optim.param_groups:
|
|
fake_params_list = list()
|
|
|
|
for param in group['params']:
|
|
if is_ddp_ignored(param):
|
|
continue
|
|
chunk16 = self.chunk_manager.get_chunk(param)
|
|
range_pair = get_range_pair(chunk16, param)
|
|
if range_pair[0] >= range_pair[1]:
|
|
continue
|
|
|
|
fake_param = torch.nn.Parameter(torch.empty([0]))
|
|
self.param_to_chunk32[fake_param] = chunk16.paired_chunk
|
|
self.param_to_range[fake_param] = range_pair
|
|
|
|
fake_params_list.append(fake_param)
|
|
|
|
group['params'] = fake_params_list
|