mirror of
https://github.com/hpcaitech/ColossalAI.git
synced 2026-01-21 14:13:45 +00:00
* init
* rename and remove useless func
* basic chunk
* add evoformer
* align evoformer
* add meta
* basic chunk
* basic memory
* finish basic inference memory estimation
* finish memory estimation
* fix bug
* finish memory estimation
* add part of index tracer
* finish basic index tracer
* add doc string
* add doc str
* polish code
* polish code
* update active log
* polish code
* add possible region search
* finish region search loop
* finish chunk define
* support new op
* rename index tracer
* finishi codegen on msa
* redesign index tracer, add source and change compute
* pass outproduct mean
* code format
* code format
* work with outerproductmean and msa
* code style
* code style
* code style
* code style
* change threshold
* support check_index_duplicate
* support index dupilictae and update loop
* support output
* update memory estimate
* optimise search
* fix layernorm
* move flow tracer
* refactor flow tracer
* format code
* refactor flow search
* code style
* adapt codegen to prepose node
* code style
* remove abandoned function
* remove flow tracer
* code style
* code style
* reorder nodes
* finish node reorder
* update run
* code style
* add chunk select class
* add chunk select
* code style
* add chunksize in emit, fix bug in reassgin shape
* code style
* turn off print mem
* add evoformer openfold init
* init openfold
* add benchmark
* add print
* code style
* code style
* init openfold
* update openfold
* align openfold
* use max_mem to control stratge
* update source add
* add reorder in mem estimator
* improve reorder efficeincy
* support ones_like, add prompt if fit mode search fail
* fix a bug in ones like, dont gen chunk if dim size is 1
* fix bug again
* update min memory stratege, reduce mem usage by 30%
* last version of benchmark
* refactor structure
* restruct dir
* update test
* rename
* take apart chunk code gen
* close mem and code print
* code format
* rename ambiguous variable
* seperate flow tracer
* seperate input node dim search
* seperate prepose_nodes
* seperate non chunk input
* seperate reorder
* rename
* ad reorder graph
* seperate trace flow
* code style
* code style
* fix typo
* set benchmark
* rename test
* update codegen test
* Fix state_dict key missing issue of the ZeroDDP (#2363)
* Fix state_dict output for ZeroDDP duplicated parameters
* Rewrite state_dict based on get_static_torch_model
* Modify get_static_torch_model to be compatible with the lower version (ZeroDDP)
* update codegen test
* update codegen test
* add chunk search test
* code style
* add available
* [hotfix] fix gpt gemini example (#2404)
* [hotfix] fix gpt gemini example
* [example] add new assertions
* remove autochunk_available
* [workflow] added nightly release to pypi (#2403)
* add comments
* code style
* add doc for search chunk
* [doc] updated readme regarding pypi installation (#2406)
* add doc for search
* [doc] updated kernel-related optimisers' docstring (#2385)
* [doc] updated kernel-related optimisers' docstring
* polish doc
* rename trace_index to trace_indice
* rename function from index to indice
* rename
* rename in doc
* [polish] polish code for get_static_torch_model (#2405)
* [gemini] polish code
* [testing] remove code
* [gemini] make more robust
* rename
* rename
* remove useless function
* [worfklow] added coverage test (#2399)
* [worfklow] added coverage test
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* add doc for trace indice
* [docker] updated Dockerfile and release workflow (#2410)
* add doc
* update doc
* add available
* change imports
* add test in import
* [workflow] refactored the example check workflow (#2411)
* [workflow] refactored the example check workflow
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* Update parallel_context.py (#2408)
* [hotfix] add DISTPAN argument for benchmark (#2412)
* change the benchmark config file
* change config
* revert config file
* rename distpan to distplan
* [workflow] added precommit check for code consistency (#2401)
* [workflow] added precommit check for code consistency
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* adapt new fx
* [workflow] added translation for non-english comments (#2414)
* [setup] refactored setup.py for dependency graph (#2413)
* change import
* update doc
* [workflow] auto comment if precommit check fails (#2417)
* [hotfix] add norm clearing for the overflow step (#2416)
* [examples] adding tflops to PaLM (#2365)
* [workflow]auto comment with test coverage report (#2419)
* [workflow]auto comment with test coverage report
* polish code
* polish yaml
* [doc] added documentation for CI/CD (#2420)
* [doc] added documentation for CI/CD
* polish markdown
* polish markdown
* polish markdown
* [example] removed duplicated stable diffusion example (#2424)
* [zero] add inference mode and its unit test (#2418)
* [workflow] report test coverage even if below threshold (#2431)
* [example] improved the clarity yof the example readme (#2427)
* [example] improved the clarity yof the example readme
* polish workflow
* polish workflow
* polish workflow
* polish workflow
* polish workflow
* polish workflow
* [ddp] add is_ddp_ignored (#2434)
[ddp] rename to is_ddp_ignored
* [workflow] make test coverage report collapsable (#2436)
* [autoparallel] add shard option (#2423)
* [fx] allow native ckpt trace and codegen. (#2438)
* [cli] provided more details if colossalai run fail (#2442)
* [autoparallel] integrate device mesh initialization into autoparallelize (#2393)
* [autoparallel] integrate device mesh initialization into autoparallelize
* add megatron solution
* update gpt autoparallel examples with latest api
* adapt beta value to fit the current computation cost
* [zero] fix state_dict and load_state_dict for ddp ignored parameters (#2443)
* [ddp] add is_ddp_ignored
[ddp] rename to is_ddp_ignored
* [zero] fix state_dict and load_state_dict
* fix bugs
* [zero] update unit test for ZeroDDP
* [example] updated the hybrid parallel tutorial (#2444)
* [example] updated the hybrid parallel tutorial
* polish code
* [zero] add warning for ignored parameters (#2446)
* [example] updated large-batch optimizer tutorial (#2448)
* [example] updated large-batch optimizer tutorial
* polish code
* polish code
* [example] fixed seed error in train_dreambooth_colossalai.py (#2445)
* [workflow] fixed the on-merge condition check (#2452)
* [workflow] automated the compatiblity test (#2453)
* [workflow] automated the compatiblity test
* polish code
* [autoparallel] update binary elementwise handler (#2451)
* [autoparallel] update binary elementwise handler
* polish
* [workflow] automated bdist wheel build (#2459)
* [workflow] automated bdist wheel build
* polish workflow
* polish readme
* polish readme
* Fix False warning in initialize.py (#2456)
* Update initialize.py
* pre-commit run check
* [examples] update autoparallel tutorial demo (#2449)
* [examples] update autoparallel tutorial demo
* add test_ci.sh
* polish
* add conda yaml
* [cli] fixed hostname mismatch error (#2465)
* [example] integrate autoparallel demo with CI (#2466)
* [example] integrate autoparallel demo with CI
* polish code
* polish code
* polish code
* polish code
* [zero] low level optim supports ProcessGroup (#2464)
* [example] update vit ci script (#2469)
* [example] update vit ci script
* [example] update requirements
* [example] update requirements
* [example] integrate seq-parallel tutorial with CI (#2463)
* [zero] polish low level optimizer (#2473)
* polish pp middleware (#2476)
Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>
* [example] update gpt gemini example ci test (#2477)
* [zero] add unit test for low-level zero init (#2474)
* [workflow] fixed the skip condition of example weekly check workflow (#2481)
* [example] stable diffusion add roadmap
* add dummy test_ci.sh
* [example] stable diffusion add roadmap (#2482)
* [CI] add test_ci.sh for palm, opt and gpt (#2475)
* polish code
* [example] titans for gpt
* polish readme
* remove license
* polish code
* update readme
* [example] titans for gpt (#2484)
* [autoparallel] support origin activation ckpt on autoprallel system (#2468)
* [autochunk] support evoformer tracer (#2485)
support full evoformer tracer, which is a main module of alphafold. previously we just support a simplifed version of it.
1. support some evoformer's op in fx
2. support evoformer test
3. add repos for test code
* [example] fix requirements (#2488)
* [zero] add unit testings for hybrid parallelism (#2486)
* [hotfix] gpt example titans bug #2493
* polish code and fix dataloader bugs
* [hotfix] gpt example titans bug #2493 (#2494)
* [fx] allow control of ckpt_codegen init (#2498)
* [fx] allow control of ckpt_codegen init
Currently in ColoGraphModule, ActivationCheckpointCodeGen will be set automatically in __init__. But other codegen can't be set if so.
So I add an arg to control whether to set ActivationCheckpointCodeGen in __init__.
* code style
* [example] dreambooth example
* add test_ci.sh to dreambooth
* [autochunk] support autochunk on evoformer (#2497)
* Revert "Update parallel_context.py (#2408)"
This reverts commit 7d5640b9db.
* add avg partition (#2483)
Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>
* [auto-chunk] support extramsa (#3) (#2504)
* [utils] lazy init. (#2148)
* [utils] lazy init.
* [utils] remove description.
* [utils] complete.
* [utils] finalize.
* [utils] fix names.
* [autochunk] support parsing blocks (#2506)
* [zero] add strict ddp mode (#2508)
* [zero] add strict ddp mode
* [polish] add comments for strict ddp mode
* [zero] fix test error
* [doc] update opt and tutorial links (#2509)
* [workflow] fixed changed file detection (#2515)
Co-authored-by: oahzxl <xuanlei.zhao@gmail.com>
Co-authored-by: eric8607242 <e0928021388@gmail.com>
Co-authored-by: HELSON <c2h214748@gmail.com>
Co-authored-by: Frank Lee <somerlee.9@gmail.com>
Co-authored-by: Haofan Wang <haofanwang.ai@gmail.com>
Co-authored-by: Jiarui Fang <fangjiarui123@gmail.com>
Co-authored-by: ZijianYY <119492445+ZijianYY@users.noreply.github.com>
Co-authored-by: YuliangLiu0306 <72588413+YuliangLiu0306@users.noreply.github.com>
Co-authored-by: Super Daniel <78588128+super-dainiu@users.noreply.github.com>
Co-authored-by: ver217 <lhx0217@gmail.com>
Co-authored-by: Ziyue Jiang <ziyue.jiang97@gmail.com>
Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>
Co-authored-by: oahzxl <43881818+oahzxl@users.noreply.github.com>
Co-authored-by: binmakeswell <binmakeswell@gmail.com>
Co-authored-by: Fazzie-Maqianli <55798671+Fazziekey@users.noreply.github.com>
Co-authored-by: アマデウス <kurisusnowdeng@users.noreply.github.com>
204 lines
8.2 KiB
Python
204 lines
8.2 KiB
Python
import os
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import re
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from datetime import datetime
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from setuptools import find_packages, setup
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from op_builder.utils import get_cuda_bare_metal_version
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try:
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import torch
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from torch.utils.cpp_extension import CUDA_HOME, BuildExtension, CUDAExtension
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print("\n\ntorch.__version__ = {}\n\n".format(torch.__version__))
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TORCH_MAJOR = int(torch.__version__.split('.')[0])
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TORCH_MINOR = int(torch.__version__.split('.')[1])
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if TORCH_MAJOR < 1 or (TORCH_MAJOR == 1 and TORCH_MINOR < 10):
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raise RuntimeError("Colossal-AI requires Pytorch 1.10 or newer.\n"
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"The latest stable release can be obtained from https://pytorch.org/")
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TORCH_AVAILABLE = True
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except ImportError:
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TORCH_AVAILABLE = False
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CUDA_HOME = None
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# ninja build does not work unless include_dirs are abs path
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this_dir = os.path.dirname(os.path.abspath(__file__))
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build_cuda_ext = False
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ext_modules = []
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is_nightly = int(os.environ.get('NIGHTLY', '0')) == 1
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if int(os.environ.get('CUDA_EXT', '0')) == 1:
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if not TORCH_AVAILABLE:
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raise ModuleNotFoundError(
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"PyTorch is not found while CUDA_EXT=1. You need to install PyTorch first in order to build CUDA extensions"
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)
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if not CUDA_HOME:
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raise RuntimeError(
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"CUDA_HOME is not found while CUDA_EXT=1. You need to export CUDA_HOME environment vairable or install CUDA Toolkit first in order to build CUDA extensions"
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)
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build_cuda_ext = True
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def check_cuda_torch_binary_vs_bare_metal(cuda_dir):
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raw_output, bare_metal_major, bare_metal_minor = get_cuda_bare_metal_version(cuda_dir)
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torch_binary_major = torch.version.cuda.split(".")[0]
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torch_binary_minor = torch.version.cuda.split(".")[1]
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print("\nCompiling cuda extensions with")
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print(raw_output + "from " + cuda_dir + "/bin\n")
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if bare_metal_major != torch_binary_major:
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print(f'The detected CUDA version ({raw_output}) mismatches the version that was used to compile PyTorch '
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f'({torch.version.cuda}). CUDA extension will not be installed.')
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return False
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if bare_metal_minor != torch_binary_minor:
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print("\nWarning: Cuda extensions are being compiled with a version of Cuda that does "
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"not match the version used to compile Pytorch binaries. "
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f"Pytorch binaries were compiled with Cuda {torch.version.cuda}.\n"
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"In some cases, a minor-version mismatch will not cause later errors: "
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"https://github.com/NVIDIA/apex/pull/323#discussion_r287021798. ")
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return True
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def check_cuda_availability(cuda_dir):
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if not torch.cuda.is_available():
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# https://github.com/NVIDIA/apex/issues/486
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# Extension builds after https://github.com/pytorch/pytorch/pull/23408 attempt to query
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# torch.cuda.get_device_capability(), which will fail if you are compiling in an environment
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# without visible GPUs (e.g. during an nvidia-docker build command).
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print(
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'\nWarning: Torch did not find available GPUs on this system.\n',
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'If your intention is to cross-compile, this is not an error.\n'
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'By default, Colossal-AI will cross-compile for Pascal (compute capabilities 6.0, 6.1, 6.2),\n'
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'Volta (compute capability 7.0), Turing (compute capability 7.5),\n'
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'and, if the CUDA version is >= 11.0, Ampere (compute capability 8.0).\n'
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'If you wish to cross-compile for a single specific architecture,\n'
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'export TORCH_CUDA_ARCH_LIST="compute capability" before running setup.py.\n')
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if os.environ.get("TORCH_CUDA_ARCH_LIST", None) is None:
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_, bare_metal_major, _ = get_cuda_bare_metal_version(cuda_dir)
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if int(bare_metal_major) == 11:
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os.environ["TORCH_CUDA_ARCH_LIST"] = "6.0;6.1;6.2;7.0;7.5;8.0"
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else:
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os.environ["TORCH_CUDA_ARCH_LIST"] = "6.0;6.1;6.2;7.0;7.5"
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return False
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if cuda_dir is None:
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print("nvcc was not found. CUDA extension will not be installed. If you're installing within a container from "
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"https://hub.docker.com/r/pytorch/pytorch, only images whose names contain 'devel' will provide nvcc.")
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return False
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return True
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def append_nvcc_threads(nvcc_extra_args):
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_, bare_metal_major, bare_metal_minor = get_cuda_bare_metal_version(CUDA_HOME)
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if int(bare_metal_major) >= 11 and int(bare_metal_minor) >= 2:
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return nvcc_extra_args + ["--threads", "4"]
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return nvcc_extra_args
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def fetch_requirements(path):
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with open(path, 'r') as fd:
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return [r.strip() for r in fd.readlines()]
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def fetch_readme():
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with open('README.md', encoding='utf-8') as f:
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return f.read()
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def get_version():
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setup_file_path = os.path.abspath(__file__)
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project_path = os.path.dirname(setup_file_path)
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version_txt_path = os.path.join(project_path, 'version.txt')
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version_py_path = os.path.join(project_path, 'colossalai/version.py')
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with open(version_txt_path) as f:
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version = f.read().strip()
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if build_cuda_ext:
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torch_version = '.'.join(torch.__version__.split('.')[:2])
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cuda_version = '.'.join(get_cuda_bare_metal_version(CUDA_HOME)[1:])
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version += f'+torch{torch_version}cu{cuda_version}'
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# write version into version.py
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with open(version_py_path, 'w') as f:
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f.write(f"__version__ = '{version}'\n")
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return version
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if build_cuda_ext:
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build_cuda_ext = check_cuda_availability(CUDA_HOME) and check_cuda_torch_binary_vs_bare_metal(CUDA_HOME)
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if build_cuda_ext:
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# Set up macros for forward/backward compatibility hack around
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# https://github.com/pytorch/pytorch/commit/4404762d7dd955383acee92e6f06b48144a0742e
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# and
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# https://github.com/NVIDIA/apex/issues/456
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# https://github.com/pytorch/pytorch/commit/eb7b39e02f7d75c26d8a795ea8c7fd911334da7e#diff-4632522f237f1e4e728cb824300403ac
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from op_builder import ALL_OPS
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for name, builder_cls in ALL_OPS.items():
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print(f'===== Building Extension {name} =====')
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ext_modules.append(builder_cls().builder())
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# always put not nightly branch as the if branch
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# otherwise github will treat colossalai-nightly as the project name
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# and it will mess up with the dependency graph insights
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if not is_nightly:
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version = get_version()
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package_name = 'colossalai'
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else:
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# use date as the nightly version
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version = datetime.today().strftime('%Y.%m.%d')
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package_name = 'colossalai-nightly'
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setup(name=package_name,
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version=version,
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packages=find_packages(exclude=(
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'benchmark',
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'docker',
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'tests',
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'docs',
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'examples',
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'tests',
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'scripts',
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'requirements',
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'*.egg-info',
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)),
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description='An integrated large-scale model training system with efficient parallelization techniques',
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long_description=fetch_readme(),
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long_description_content_type='text/markdown',
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license='Apache Software License 2.0',
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url='https://www.colossalai.org',
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project_urls={
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'Forum': 'https://github.com/hpcaitech/ColossalAI/discussions',
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'Bug Tracker': 'https://github.com/hpcaitech/ColossalAI/issues',
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'Examples': 'https://github.com/hpcaitech/ColossalAI-Examples',
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'Documentation': 'http://colossalai.readthedocs.io',
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'Github': 'https://github.com/hpcaitech/ColossalAI',
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},
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ext_modules=ext_modules,
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cmdclass={'build_ext': BuildExtension} if ext_modules else {},
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install_requires=fetch_requirements('requirements/requirements.txt'),
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entry_points='''
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[console_scripts]
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colossalai=colossalai.cli:cli
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''',
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python_requires='>=3.6',
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classifiers=[
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'Programming Language :: Python :: 3',
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'License :: OSI Approved :: Apache Software License',
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'Environment :: GPU :: NVIDIA CUDA',
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'Topic :: Scientific/Engineering :: Artificial Intelligence',
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'Topic :: System :: Distributed Computing',
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],
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package_data={
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'colossalai': [
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'_C/*.pyi', 'kernel/cuda_native/csrc/*', 'kernel/cuda_native/csrc/kernel/*',
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'kernel/cuda_native/csrc/kernels/include/*'
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]
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})
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