kata-containers/tests/metrics/report/report_dockerfile/fio-writes.R
Gabriela Cervantes fce2487971 metrics: Add metrics report R files
This PR adds the metrics report R files.

Signed-off-by: Gabriela Cervantes <gabriela.cervantes.tellez@intel.com>
2023-08-29 16:45:22 +00:00

261 lines
8.8 KiB
R

#!/usr/bin/env Rscript
# Copyright (c) 2018-2023 Intel Corporation
#
# SPDX-License-Identifier: Apache-2.0
# Display details for 'fio' random writes storage IO tests.
library(ggplot2) # ability to plot nicely
library(gridExtra) # So we can plot multiple graphs together
suppressMessages(suppressWarnings(library(ggpubr))) # for ggtexttable
suppressMessages(library(jsonlite)) # to load the data
suppressMessages(suppressWarnings(library(tidyr))) # for gather
library(tibble)
testnames=c(
"fio-randwrite-128",
"fio-randwrite-256",
"fio-randwrite-512",
"fio-randwrite-1k",
"fio-randwrite-2k",
"fio-randwrite-4k",
"fio-randwrite-8k",
"fio-randwrite-16k",
"fio-randwrite-32k",
"fio-randwrite-64k"
)
data2=c()
all_ldata=c()
all_ldata2=c()
stats=c()
rstats=c()
rstats_names=c()
# Where to store up the stats for the tables
write_bw_stats=c()
write_iops_stats=c()
write_lat95_stats=c()
write_lat99_stats=c()
# For each set of results
for (currentdir in resultdirs) {
bw_dirstats=c()
iops_dirstats=c()
lat95_dirstats=c()
lat99_dirstats=c()
# Derive the name from the test result dirname
datasetname=basename(currentdir)
for (testname in testnames) {
fname=paste(inputdir, currentdir, testname, '.json', sep="")
if ( !file.exists(fname)) {
#warning(paste("Skipping non-existent file: ", fname))
next
}
# Import the data
fdata=fromJSON(fname)
# De-nest the test specific named data
fdata=fdata[[testname]]
blocksize=fdata$Raw$'global options'$bs
# Extract the latency data - it comes as a table of percentiles, so
# we have to do a little work...
clat=data.frame(clat_ns=fdata$Raw$jobs[[1]]$write$clat_ns$percentile)
# Generate a clat data set with 'clean' percentile numbers so
# we can sensibly plot it later on.
clat2=clat
colnames(clat2)<-sub("clat_ns.", "", colnames(clat2))
colnames(clat2)<-sub("0000", "", colnames(clat2))
ldata2=gather(clat2)
colnames(ldata2)[colnames(ldata2)=="key"] <- "percentile"
colnames(ldata2)[colnames(ldata2)=="value"] <- "ms"
ldata2$ms=ldata2$ms/1000000 #ns->ms
ldata2=cbind(ldata2, runtime=rep(datasetname, length(ldata2$percentile)))
ldata2=cbind(ldata2, blocksize=rep(blocksize, length(ldata2$percentile)))
# Pull the 95 and 99 percentiles for the boxplot diagram.
# Our values fall more in the range of ms...
pc95data=tibble(percentile=clat$clat_ns.95.000000/1000000)
pc95data=cbind(pc95data, runtime=rep(paste(datasetname, "95pc", sep="-"), length(pc95data$percentile)))
pc99data=tibble(percentile=clat$clat_ns.99.000000/1000000)
pc99data=cbind(pc99data, runtime=rep(paste(datasetname, "99pc", sep="-"), length(pc95data$percentile)))
ldata=rbind(pc95data, pc99data)
ldata=cbind(ldata, blocksize=rep(blocksize, length(ldata$percentile)))
# We want total bandwidth, so that is the sum of the bandwidths
# from all the write 'jobs'.
mdata=data.frame(write_bw_mps=as.numeric(sum(fdata$Raw$jobs[[1]]$write$bw)/1024))
mdata=cbind(mdata, iops_tot=as.numeric(sum(fdata$Raw$jobs[[1]]$write$iops)))
mdata=cbind(mdata, runtime=rep(datasetname, length(mdata[, "write_bw_mps"]) ))
mdata=cbind(mdata, blocksize=rep(blocksize, length(mdata[, "write_bw_mps"]) ))
# Extract the stats tables
bw_dirstats=rbind(bw_dirstats, round(mdata$write_bw_mps, digits=1))
# Rowname hack to get the blocksize recorded
rownames(bw_dirstats)[nrow(bw_dirstats)]=blocksize
iops_dirstats=rbind(iops_dirstats, round(mdata$iops_tot, digits=1))
rownames(iops_dirstats)[nrow(iops_dirstats)]=blocksize
# And do the 95 and 99 percentiles as tables as well
lat95_dirstats=rbind(lat95_dirstats, round(mean(clat$clat_ns.95.000000)/1000000, digits=1))
rownames(lat95_dirstats)[nrow(lat95_dirstats)]=blocksize
lat99_dirstats=rbind(lat99_dirstats, round(mean(clat$clat_ns.99.000000)/1000000, digits=1))
rownames(lat99_dirstats)[nrow(lat99_dirstats)]=blocksize
# Store away as single sets
data2=rbind(data2, mdata)
all_ldata=rbind(all_ldata, ldata)
all_ldata2=rbind(all_ldata2, ldata2)
}
# Collect up for each dir we process into a column
write_bw_stats=cbind(write_bw_stats, bw_dirstats)
colnames(write_bw_stats)[ncol(write_bw_stats)]=datasetname
write_iops_stats=cbind(write_iops_stats, iops_dirstats)
colnames(write_iops_stats)[ncol(write_iops_stats)]=datasetname
write_lat95_stats=cbind(write_lat95_stats, lat95_dirstats)
colnames(write_lat95_stats)[ncol(write_lat95_stats)]=datasetname
write_lat99_stats=cbind(write_lat99_stats, lat99_dirstats)
colnames(write_lat99_stats)[ncol(write_lat99_stats)]=datasetname
}
# To get a nice looking table, we need to extract the rownames into their
# own column
write_bw_stats=cbind(Bandwidth=rownames(write_bw_stats), write_bw_stats)
write_bw_stats=cbind(write_bw_stats, Units=rep("MB/s", nrow(write_bw_stats)))
write_iops_stats=cbind(IOPS=rownames(write_iops_stats), write_iops_stats)
write_iops_stats=cbind(write_iops_stats, Units=rep("IOP/s", nrow(write_iops_stats)))
write_lat95_stats=cbind('lat 95pc'=rownames(write_lat95_stats), write_lat95_stats)
write_lat95_stats=cbind(write_lat95_stats, Units=rep("ms", nrow(write_lat95_stats)))
write_lat99_stats=cbind('lat 99pc'=rownames(write_lat99_stats), write_lat99_stats)
write_lat99_stats=cbind(write_lat99_stats, Units=rep("ms", nrow(write_lat99_stats)))
# lineplot of total bandwidth across blocksizes.
write_bw_line_plot <- ggplot() +
geom_line( data=data2, aes(blocksize, write_bw_mps, group=runtime, color=runtime)) +
ylim(0, NA) +
ggtitle("Random Write total bandwidth") +
xlab("Blocksize") +
ylab("Bandwidth (MiB/s)") +
theme(
axis.text.x=element_text(angle=90),
legend.position=c(0.35,0.8),
legend.title=element_text(size=5),
legend.text=element_text(size=5),
legend.background = element_rect(fill=alpha('blue', 0.2))
)
# lineplot of IOPS across blocksizes
write_iops_line_plot <- ggplot() +
geom_line( data=data2, aes(blocksize, iops_tot, group=runtime, color=runtime)) +
ylim(0, NA) +
ggtitle("Random Write total IOPS") +
xlab("Blocksize") +
ylab("IOPS") +
theme(
axis.text.x=element_text(angle=90),
legend.position=c(0.35,0.8),
legend.title=element_text(size=5),
legend.text=element_text(size=5),
legend.background = element_rect(fill=alpha('blue', 0.2))
)
# boxplot of 95 and 99 percentiles covering the parallel jobs, shown across
# the blocksizes.
write_clat_box_plot <- ggplot() +
geom_boxplot( data=all_ldata, aes(blocksize, percentile, color=runtime)) +
stat_summary( data=all_ldata, aes(blocksize, percentile, group=runtime, color=runtime), fun.y=mean, geom="line") +
ylim(0, NA) +
ggtitle("Random Write completion latency", subtitle="95&99 Percentiles, boxplot across jobs") +
xlab("Blocksize") +
ylab("Latency (ms)") +
theme(axis.text.x=element_text(angle=90)) +
# Use the 'paired' colour matrix as we are setting these up as pairs of
# 95 and 99 percentiles, and it is much easier to visually group those to
# each runtime if we use this colourmap.
scale_colour_brewer(palette="Paired")
# completion latency line plot across the percentiles, for a specific blocksize only
# as otherwise the graph would be far too noisy.
which_blocksize='4k'
clat_line_subtitle=paste("For blocksize", which_blocksize, sep=" ")
single_blocksize=subset(all_ldata2, blocksize==which_blocksize)
clat_line=aggregate(
single_blocksize$ms,
by=list(
percentile=single_blocksize$percentile,
blocksize=single_blocksize$blocksize,
runtime=single_blocksize$runtime
),
FUN=mean
)
clat_line$percentile=as.numeric(clat_line$percentile)
write_clat_line_plot <- ggplot() +
geom_line( data=clat_line, aes(percentile, x, group=runtime, color=runtime)) +
ylim(0, NA) +
ggtitle("Random Write completion latency percentiles", subtitle=clat_line_subtitle) +
xlab("Percentile") +
ylab("Time (ms)") +
theme(
axis.text.x=element_text(angle=90),
legend.position=c(0.35,0.8),
legend.title=element_text(size=5),
legend.text=element_text(size=5),
legend.background = element_rect(fill=alpha('blue', 0.2))
)
master_plot = grid.arrange(
write_bw_line_plot,
write_iops_line_plot,
write_clat_box_plot,
write_clat_line_plot,
nrow=2,
ncol=2 )
# A bit of an odd tweak to force a pagebreak between the pictures and
# the tables. This only works because we have a `results='asis'` in the Rmd
# R fragment.
cat("\n\n\\pagebreak\n")
write_bw_stats_plot = suppressWarnings(ggtexttable(write_bw_stats,
theme=ttheme(base_size=10),
rows=NULL
))
write_iops_stats_plot = suppressWarnings(ggtexttable(write_iops_stats,
theme=ttheme(base_size=10),
rows=NULL
))
write_lat95_stats_plot = suppressWarnings(ggtexttable(write_lat95_stats,
theme=ttheme(base_size=10),
rows=NULL
))
write_lat99_stats_plot = suppressWarnings(ggtexttable(write_lat99_stats,
theme=ttheme(base_size=10),
rows=NULL
))
# and then the statistics tables
stats_plot = grid.arrange(
write_bw_stats_plot,
write_iops_stats_plot,
write_lat95_stats_plot,
write_lat99_stats_plot,
nrow=4,
ncol=1 )