langchain/libs/community/langchain_community/utilities/bibtex.py
Bagatur a0c2281540
infra: update mypy 1.10, ruff 0.5 (#23721)
```python
"""python scripts/update_mypy_ruff.py"""
import glob
import tomllib
from pathlib import Path

import toml
import subprocess
import re

ROOT_DIR = Path(__file__).parents[1]


def main():
    for path in glob.glob(str(ROOT_DIR / "libs/**/pyproject.toml"), recursive=True):
        print(path)
        with open(path, "rb") as f:
            pyproject = tomllib.load(f)
        try:
            pyproject["tool"]["poetry"]["group"]["typing"]["dependencies"]["mypy"] = (
                "^1.10"
            )
            pyproject["tool"]["poetry"]["group"]["lint"]["dependencies"]["ruff"] = (
                "^0.5"
            )
        except KeyError:
            continue
        with open(path, "w") as f:
            toml.dump(pyproject, f)
        cwd = "/".join(path.split("/")[:-1])
        completed = subprocess.run(
            "poetry lock --no-update; poetry install --with typing; poetry run mypy . --no-color",
            cwd=cwd,
            shell=True,
            capture_output=True,
            text=True,
        )
        logs = completed.stdout.split("\n")

        to_ignore = {}
        for l in logs:
            if re.match("^(.*)\:(\d+)\: error:.*\[(.*)\]", l):
                path, line_no, error_type = re.match(
                    "^(.*)\:(\d+)\: error:.*\[(.*)\]", l
                ).groups()
                if (path, line_no) in to_ignore:
                    to_ignore[(path, line_no)].append(error_type)
                else:
                    to_ignore[(path, line_no)] = [error_type]
        print(len(to_ignore))
        for (error_path, line_no), error_types in to_ignore.items():
            all_errors = ", ".join(error_types)
            full_path = f"{cwd}/{error_path}"
            try:
                with open(full_path, "r") as f:
                    file_lines = f.readlines()
            except FileNotFoundError:
                continue
            file_lines[int(line_no) - 1] = (
                file_lines[int(line_no) - 1][:-1] + f"  # type: ignore[{all_errors}]\n"
            )
            with open(full_path, "w") as f:
                f.write("".join(file_lines))

        subprocess.run(
            "poetry run ruff format .; poetry run ruff --select I --fix .",
            cwd=cwd,
            shell=True,
            capture_output=True,
            text=True,
        )


if __name__ == "__main__":
    main()

```
2024-07-03 10:33:27 -07:00

89 lines
2.4 KiB
Python

"""Util that calls bibtexparser."""
import logging
from typing import Any, Dict, List, Mapping
from langchain_core.pydantic_v1 import BaseModel, Extra, root_validator
logger = logging.getLogger(__name__)
OPTIONAL_FIELDS = [
"annotate",
"booktitle",
"editor",
"howpublished",
"journal",
"keywords",
"note",
"organization",
"publisher",
"school",
"series",
"type",
"doi",
"issn",
"isbn",
]
class BibtexparserWrapper(BaseModel):
"""Wrapper around bibtexparser.
To use, you should have the ``bibtexparser`` python package installed.
https://bibtexparser.readthedocs.io/en/master/
This wrapper will use bibtexparser to load a collection of references from
a bibtex file and fetch document summaries.
"""
class Config:
"""Configuration for this pydantic object."""
extra = Extra.forbid
@root_validator(pre=True)
def validate_environment(cls, values: Dict) -> Dict:
"""Validate that the python package exists in environment."""
try:
import bibtexparser # noqa
except ImportError:
raise ImportError(
"Could not import bibtexparser python package. "
"Please install it with `pip install bibtexparser`."
)
return values
def load_bibtex_entries(self, path: str) -> List[Dict[str, Any]]:
"""Load bibtex entries from the bibtex file at the given path."""
import bibtexparser
with open(path) as file:
entries = bibtexparser.load(file).entries
return entries
def get_metadata(
self, entry: Mapping[str, Any], load_extra: bool = False
) -> Dict[str, Any]:
"""Get metadata for the given entry."""
publication = entry.get("journal") or entry.get("booktitle")
if "url" in entry:
url = entry["url"]
elif "doi" in entry:
url = f'https://doi.org/{entry["doi"]}'
else:
url = None
meta = {
"id": entry.get("ID"),
"published_year": entry.get("year"),
"title": entry.get("title"),
"publication": publication,
"authors": entry.get("author"),
"abstract": entry.get("abstract"),
"url": url,
}
if load_extra:
for field in OPTIONAL_FIELDS:
meta[field] = entry.get(field)
return {k: v for k, v in meta.items() if v is not None}