From cc6091961bac136b1d7eaff3730ad32407b76a07 Mon Sep 17 00:00:00 2001 From: zoazhyga Date: Thu, 5 Sep 2024 17:48:15 +0200 Subject: [PATCH] [dev] add support for all image pages inside pdf --- experiments/llama_index.ipynb | 239 ++- poetry.lock | 1510 ++++++++++++++++- .../components/ingest/ingest_component.py | 5 +- .../components/ingest/ingest_helper.py | 50 +- pyproject.toml | 4 + scripts/ingest_folder.py | 2 +- 6 files changed, 1792 insertions(+), 18 deletions(-) diff --git a/experiments/llama_index.ipynb b/experiments/llama_index.ipynb index 54f657bb..2b60d3ec 100644 --- a/experiments/llama_index.ipynb +++ b/experiments/llama_index.ipynb @@ -2,15 +2,246 @@ "cells": [ { "cell_type": "code", - "execution_count": null, "id": "initial_id", "metadata": { - "collapsed": true + "collapsed": true, + "ExecuteTime": { + "end_time": "2024-09-05T14:03:18.404518Z", + "start_time": "2024-09-05T14:03:18.401535Z" + } }, + "source": "# Read PDF", "outputs": [], + "execution_count": 33 + }, + { + "metadata": { + "ExecuteTime": { + "end_time": "2024-09-05T14:39:16.282184Z", + "start_time": "2024-09-05T14:39:16.279186Z" + } + }, + "cell_type": "code", "source": [ - "" - ] + "import pdf2image\n", + "import pytesseract\n", + "from pytesseract import Output, TesseractError" + ], + "id": "ad1ffea2dcb7dcaf", + "outputs": [], + "execution_count": 74 + }, + { + "metadata": { + "ExecuteTime": { + "end_time": "2024-09-05T14:39:16.648563Z", + "start_time": "2024-09-05T14:39:16.646494Z" + } + }, + "cell_type": "code", + "source": "file = \"../local_data/input_raw/test/26223.pdf\"", + "id": "f38556f4ef09d669", + "outputs": [], + "execution_count": 75 + }, + { + "metadata": { + "ExecuteTime": { + "end_time": "2024-09-05T14:39:23.492339Z", + "start_time": "2024-09-05T14:39:18.280277Z" + } + }, + "cell_type": "code", + "source": "images = pdf2image.convert_from_path(file)", + "id": "67286a6f741debb0", + "outputs": [], + "execution_count": 76 + }, + { + "metadata": { + "ExecuteTime": { + "end_time": "2024-09-05T14:39:38.005863Z", + "start_time": "2024-09-05T14:39:36.119195Z" + } + }, + "cell_type": "code", + "source": [ + "pil_im = images[5] # assuming that we're interested in the first page only\n", + "\n", + "ocr_dict = pytesseract.image_to_string(pil_im, lang=\"rus\")" + ], + "id": "ec339f7da13fc37f", + "outputs": [], + "execution_count": 79 + }, + { + "metadata": { + "ExecuteTime": { + "end_time": "2024-09-05T14:39:49.348914Z", + "start_time": "2024-09-05T14:39:49.344588Z" + } + }, + "cell_type": "code", + "source": "print(ocr_dict)", + "id": "df86f1ed6f5f1b6e", + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "096 отдельный батальон материального обеспечения\n", + "\n", + "1099 мотострелковый полк\n", + "\n", + "| береговая ракетно-артиллерийская бригада\n", + "\n", + "военная автомобильная инспекция\n", + "\n", + "гвардейская отдельная десантно-штурмовая бригада\n", + "гвардейская отдельная инженерная бригада\n", + "отдельная вертолетная эскадрилья\n", + "отдельная танковая бригада\n", + "отдельный медицинский батальон\n", + "отдельный танковый полк\n", + "\n", + "полк радиационной, химической и биологической защиты\n", + "\n", + "смешанный авиационный полк\n", + "средняя общеобразовательная школа\n", + "\n", + "центральный узел контроля безопасности связи\n", + "\n", + "11 экипаж большой подводной лодки\n", + "\n", + "110 военная автомобильная инспекция\n", + "\n", + "110 военное представительство Министерства обороны Российской Федерации\n", + "\n", + "110 отдельная мотострелковая бригада\n", + "110 отдельный стрелковый полк\n", + "\n", + "1101 отдел государственного технического надзора\n", + "\n", + "1102 мотострелковый полк\n", + "1104 мотострелковый полк\n", + "\n", + "144\n", + "\n", + "1105 мотострелковый полк\n", + "\n", + "109 отдельный оптико-электронный узел\n", + "\n", + "11 военная автомобильная инспекция\n", + "\n", + "П главный государственный центр судеоно-медицинских и криминалистических экспертиз Министерства\n", + "\n", + "|| отдельный стрелковый полк\n", + "\n", + "11 центральная база резерва танков\n", + "\n", + "110 объединенное управление эксплуатации специальных объектов\n", + "\n", + "117 зенитный ракетный полк\n", + "\n", + "152|1118 военное представительство Министерства обороны Российской Федерации\n", + "153|1118 отдельный радиолокационный узел\n", + "\n", + "154|112 авиационный полигон\n", + "\n", + "155112 гвардейская ракетная бригада\n", + "\n", + "156| 112 отдельный вертолетный полк\n", + "\n", + "157|112 отдельный стрелковый полк\n", + "\n", + "158|1122 отдельный батальон материального обеспечения\n", + "159|1124 отдельный батальон материального обеспечения\n", + "160|1127 ремонтный завод ракетно-артиллерийского вооружения\n", + "161|113 военная автомобильная инспекция\n", + "\n", + "162|1139 отдельный батальон материального обеспечения\n", + "163|1139 отдельный измерительный пункт\n", + "\n", + "164| 114 бригада\n", + "\n", + "165| 114 военная автомобильная инспекция\n", + "\n", + "166|114 гвардейская отдельная мотострелковая бригада\n", + "\n", + "114 гвардейский мотострелковый полк\n", + "\n", + "168\n", + "\n", + "114 отделение территориальное\n", + "\n", + "169\n", + "\n", + "40 гвардейский артиллерийский полк\n", + "\n", + "170\n", + "\n", + "41 гвардейский артиллерийский полк\n", + "\n", + "171\n", + "\n", + "1142 военное представительство Министерства обороны Российской Федерации\n", + "\n", + "172\n", + "\n", + "1143 отдельный зенитный ракетный дивизион\n", + "\n", + "173\n", + "\n", + "115 военная автомобильная инспекция\n", + "\n", + "174\n", + "\n", + "5 государственный специальный химический арсенал\n", + "\n", + "175\n", + "\n", + "150 радиоэлектронный центр\n", + "\n", + "176\n", + "\n", + "177\n", + "178\n", + "\n", + "1152 мотострелковый полк\n", + "1153 мотострелковый полк\n", + "54 мотострелковый полк\n", + "\n", + "179\n", + "\n", + "1155 центр\n", + "\n", + "180\n", + "\n", + "157 пожарная команда\n", + "\n", + "ТТТ.\n", + "\n", + "181\n", + "\n", + "1158 пожарная команда.\n", + "\n", + "182\n", + "\n", + "1159 военное представительство Министерства обороны Российской Федерации\n", + "\n", + "\n" + ] + } + ], + "execution_count": 81 + }, + { + "metadata": {}, + "cell_type": "code", + "outputs": [], + "execution_count": null, + "source": "", + "id": "7e909e7dc99c7f4a" } ], "metadata": { diff --git a/poetry.lock b/poetry.lock index 0cdec5cf..6d7172cf 100644 --- a/poetry.lock +++ b/poetry.lock @@ -163,6 +163,93 @@ doc = ["Sphinx (>=7)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphin test = ["anyio[trio]", "coverage[toml] (>=7)", "exceptiongroup (>=1.2.0)", "hypothesis (>=4.0)", "psutil (>=5.9)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "uvloop (>=0.17)"] trio = ["trio (>=0.23)"] +[[package]] +name = "appnope" +version = "0.1.4" +description = "Disable App Nap on macOS >= 10.9" +optional = false +python-versions = ">=3.6" +files = [ + {file = 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"types-PyYAML"] + [[package]] name = "uritemplate" version = "4.1.1" @@ -6505,11 +7957,48 @@ files = [ [package.dependencies] anyio = ">=3.0.0" +[[package]] +name = "wcwidth" +version = "0.2.13" +description = "Measures the displayed width of unicode strings in a terminal" +optional = false +python-versions = "*" +files = [ + {file = "wcwidth-0.2.13-py2.py3-none-any.whl", hash = "sha256:3da69048e4540d84af32131829ff948f1e022c1c6bdb8d6102117aac784f6859"}, + {file = "wcwidth-0.2.13.tar.gz", hash = "sha256:72ea0c06399eb286d978fdedb6923a9eb47e1c486ce63e9b4e64fc18303972b5"}, +] + +[[package]] +name = "webcolors" +version = "24.8.0" +description = "A library for working with the color formats defined by HTML and CSS." +optional = false +python-versions = ">=3.8" +files = [ + {file = "webcolors-24.8.0-py3-none-any.whl", hash = "sha256:fc4c3b59358ada164552084a8ebee637c221e4059267d0f8325b3b560f6c7f0a"}, + {file = "webcolors-24.8.0.tar.gz", hash = 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"a95052a0546cc9d3a37dfdadb44bbbd3b6429ece529a475a7dde26eae8c1e416" diff --git a/private_gpt/components/ingest/ingest_component.py b/private_gpt/components/ingest/ingest_component.py index 5ed03959..b751da64 100644 --- a/private_gpt/components/ingest/ingest_component.py +++ b/private_gpt/components/ingest/ingest_component.py @@ -136,7 +136,10 @@ class SimpleIngestComponent(BaseIngestComponentWithIndex): return saved_documents def _save_docs(self, documents: list[Document]) -> list[Document]: - logger.debug("Transforming count=%s documents into nodes", len(documents)) + logger.debug( + "Transforming count=%s documents into nodes", + len(documents) if isinstance(documents, list) else 1, + ) with self._index_thread_lock: for document in documents: self._index.insert(document, show_progress=True) diff --git a/private_gpt/components/ingest/ingest_helper.py b/private_gpt/components/ingest/ingest_helper.py index a4fea40f..ca3f750a 100644 --- a/private_gpt/components/ingest/ingest_helper.py +++ b/private_gpt/components/ingest/ingest_helper.py @@ -1,6 +1,8 @@ import logging from pathlib import Path +import tqdm +import tempfile from llama_index.core.readers import StringIterableReader from llama_index.core.readers.base import BaseReader from llama_index.core.readers.json import JSONReader @@ -44,8 +46,8 @@ def _try_loading_included_file_formats() -> dict[str, type[BaseReader]]: default_file_reader_cls: dict[str, type[BaseReader]] = { ".hwp": HWPReader, - # ".pdf": simple_pdf_extractor if simple_pdf_extractor else PDFReader, - ".pdf": PDFReader, + # ".pdf": PDFReader, + ".pdf": SmartPDFLoader if LLMSHERPA_API_URL else PDFReader, ".docx": SmartPDFLoader if LLMSHERPA_API_URL else DocxReader, ".pptx": PptxReader, ".ppt": PptxReader, @@ -70,7 +72,7 @@ def _try_loading_included_file_formats() -> dict[str, type[BaseReader]]: FILE_READER_CLS = _try_loading_included_file_formats() FILE_READER_CLS.update( { - ".json": JSONReader(), + ".json": JSONReader, } ) @@ -88,7 +90,7 @@ class IngestionHelper: ) -> list[Document]: documents = IngestionHelper._load_file_to_documents(file_name, file_data) for document in documents: - document.metadata["file_name"] = file_name + document.metadata["file_name"] = file_data.as_posix() IngestionHelper._exclude_metadata(documents) return documents @@ -108,16 +110,44 @@ class IngestionHelper: return string_reader.load_data([file_data.read_text()]) except Exception as e: logger.error(f"Error reading file as plain text: {e}") + raise ValueError( + f"No reader found for extension={extension}, file_name={file_name}" + ) logger.debug( f"Specific reader found for extension=%s, {reader_cls=}", extension ) if reader_cls.__name__ == "SmartPDFLoader": - return reader_cls(llmsherpa_api_url=LLMSHERPA_API_URL).load_data( + documents = reader_cls(llmsherpa_api_url=LLMSHERPA_API_URL).load_data( file_data.as_posix() ) else: - return reader_cls().load_data(file_data) + documents = reader_cls().load_data(file_data) + + if len(documents) == 0 and extension == ".pdf": + logger.debug( + "No text extracted from PDF, trying to extract images from PDF" + ) + try: + import pdf2image + import pytesseract + + images = pdf2image.convert_from_path(file_data) + documents = [] + + for i, image in tqdm.tqdm(enumerate(images)): + text = pytesseract.image_to_string(image, lang="rus") + doc = StringIterableReader().load_data( + [text], + )[0] + doc.metadata["page_label"] = i + + documents.extend(doc) + except Exception as e: + logger.error(f"Error extracting images from PDF: {e}") + raise ValueError(f"No text extracted from PDF={file_name}") + + return documents @staticmethod def _exclude_metadata(documents: list[Document]) -> None: @@ -127,4 +157,10 @@ class IngestionHelper: # We don't want the Embeddings search to receive this metadata document.excluded_embed_metadata_keys = ["doc_id"] # We don't want the LLM to receive these metadata in the context - document.excluded_llm_metadata_keys = ["file_name", "doc_id", "page_label"] + # ToDo currently remove file_name + document.excluded_llm_metadata_keys = [ + # "file_name", + "doc_id", + "page_label", + ] + document.excluded_llm_metadata_keys = ["doc_id", "page_label"] diff --git a/pyproject.toml b/pyproject.toml index 24880cfe..edca517f 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -70,6 +70,10 @@ einops = {version = "^0.8.0", optional = true} llama-index-readers-smart-pdf-loader = "^0.1.4" python-pptx = "^1.0.2" pillow = "^10.4.0" +jupyter = "^1.1.1" +pypdf2 = "^3.0.1" +pytesseract = "^0.3.13" +pdf2image = "^1.17.0" [tool.poetry.extras] ui = ["gradio", "ffmpy"] diff --git a/scripts/ingest_folder.py b/scripts/ingest_folder.py index b0b3a35b..5cff2005 100755 --- a/scripts/ingest_folder.py +++ b/scripts/ingest_folder.py @@ -1,4 +1,4 @@ -#!/usr/bin/env python3 +#!/usr/bin/env pythfon3 import argparse import logging