Boyuan Yao
|
7a58dc5ad2
|
Update metainfo patch branch (#2517)
* init
* rename and remove useless func
* basic chunk
* add evoformer
* align evoformer
* add meta
* basic chunk
* basic memory
* finish basic inference memory estimation
* finish memory estimation
* fix bug
* finish memory estimation
* add part of index tracer
* finish basic index tracer
* add doc string
* add doc str
* polish code
* polish code
* update active log
* polish code
* add possible region search
* finish region search loop
* finish chunk define
* support new op
* rename index tracer
* finishi codegen on msa
* redesign index tracer, add source and change compute
* pass outproduct mean
* code format
* code format
* work with outerproductmean and msa
* code style
* code style
* code style
* code style
* change threshold
* support check_index_duplicate
* support index dupilictae and update loop
* support output
* update memory estimate
* optimise search
* fix layernorm
* move flow tracer
* refactor flow tracer
* format code
* refactor flow search
* code style
* adapt codegen to prepose node
* code style
* remove abandoned function
* remove flow tracer
* code style
* code style
* reorder nodes
* finish node reorder
* update run
* code style
* add chunk select class
* add chunk select
* code style
* add chunksize in emit, fix bug in reassgin shape
* code style
* turn off print mem
* add evoformer openfold init
* init openfold
* add benchmark
* add print
* code style
* code style
* init openfold
* update openfold
* align openfold
* use max_mem to control stratge
* update source add
* add reorder in mem estimator
* improve reorder efficeincy
* support ones_like, add prompt if fit mode search fail
* fix a bug in ones like, dont gen chunk if dim size is 1
* fix bug again
* update min memory stratege, reduce mem usage by 30%
* last version of benchmark
* refactor structure
* restruct dir
* update test
* rename
* take apart chunk code gen
* close mem and code print
* code format
* rename ambiguous variable
* seperate flow tracer
* seperate input node dim search
* seperate prepose_nodes
* seperate non chunk input
* seperate reorder
* rename
* ad reorder graph
* seperate trace flow
* code style
* code style
* fix typo
* set benchmark
* rename test
* update codegen test
* Fix state_dict key missing issue of the ZeroDDP (#2363)
* Fix state_dict output for ZeroDDP duplicated parameters
* Rewrite state_dict based on get_static_torch_model
* Modify get_static_torch_model to be compatible with the lower version (ZeroDDP)
* update codegen test
* update codegen test
* add chunk search test
* code style
* add available
* [hotfix] fix gpt gemini example (#2404)
* [hotfix] fix gpt gemini example
* [example] add new assertions
* remove autochunk_available
* [workflow] added nightly release to pypi (#2403)
* add comments
* code style
* add doc for search chunk
* [doc] updated readme regarding pypi installation (#2406)
* add doc for search
* [doc] updated kernel-related optimisers' docstring (#2385)
* [doc] updated kernel-related optimisers' docstring
* polish doc
* rename trace_index to trace_indice
* rename function from index to indice
* rename
* rename in doc
* [polish] polish code for get_static_torch_model (#2405)
* [gemini] polish code
* [testing] remove code
* [gemini] make more robust
* rename
* rename
* remove useless function
* [worfklow] added coverage test (#2399)
* [worfklow] added coverage test
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* add doc for trace indice
* [docker] updated Dockerfile and release workflow (#2410)
* add doc
* update doc
* add available
* change imports
* add test in import
* [workflow] refactored the example check workflow (#2411)
* [workflow] refactored the example check workflow
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* Update parallel_context.py (#2408)
* [hotfix] add DISTPAN argument for benchmark (#2412)
* change the benchmark config file
* change config
* revert config file
* rename distpan to distplan
* [workflow] added precommit check for code consistency (#2401)
* [workflow] added precommit check for code consistency
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* adapt new fx
* [workflow] added translation for non-english comments (#2414)
* [setup] refactored setup.py for dependency graph (#2413)
* change import
* update doc
* [workflow] auto comment if precommit check fails (#2417)
* [hotfix] add norm clearing for the overflow step (#2416)
* [examples] adding tflops to PaLM (#2365)
* [workflow]auto comment with test coverage report (#2419)
* [workflow]auto comment with test coverage report
* polish code
* polish yaml
* [doc] added documentation for CI/CD (#2420)
* [doc] added documentation for CI/CD
* polish markdown
* polish markdown
* polish markdown
* [example] removed duplicated stable diffusion example (#2424)
* [zero] add inference mode and its unit test (#2418)
* [workflow] report test coverage even if below threshold (#2431)
* [example] improved the clarity yof the example readme (#2427)
* [example] improved the clarity yof the example readme
* polish workflow
* polish workflow
* polish workflow
* polish workflow
* polish workflow
* polish workflow
* [ddp] add is_ddp_ignored (#2434)
[ddp] rename to is_ddp_ignored
* [workflow] make test coverage report collapsable (#2436)
* [autoparallel] add shard option (#2423)
* [fx] allow native ckpt trace and codegen. (#2438)
* [cli] provided more details if colossalai run fail (#2442)
* [autoparallel] integrate device mesh initialization into autoparallelize (#2393)
* [autoparallel] integrate device mesh initialization into autoparallelize
* add megatron solution
* update gpt autoparallel examples with latest api
* adapt beta value to fit the current computation cost
* [zero] fix state_dict and load_state_dict for ddp ignored parameters (#2443)
* [ddp] add is_ddp_ignored
[ddp] rename to is_ddp_ignored
* [zero] fix state_dict and load_state_dict
* fix bugs
* [zero] update unit test for ZeroDDP
* [example] updated the hybrid parallel tutorial (#2444)
* [example] updated the hybrid parallel tutorial
* polish code
* [zero] add warning for ignored parameters (#2446)
* [example] updated large-batch optimizer tutorial (#2448)
* [example] updated large-batch optimizer tutorial
* polish code
* polish code
* [example] fixed seed error in train_dreambooth_colossalai.py (#2445)
* [workflow] fixed the on-merge condition check (#2452)
* [workflow] automated the compatiblity test (#2453)
* [workflow] automated the compatiblity test
* polish code
* [autoparallel] update binary elementwise handler (#2451)
* [autoparallel] update binary elementwise handler
* polish
* [workflow] automated bdist wheel build (#2459)
* [workflow] automated bdist wheel build
* polish workflow
* polish readme
* polish readme
* Fix False warning in initialize.py (#2456)
* Update initialize.py
* pre-commit run check
* [examples] update autoparallel tutorial demo (#2449)
* [examples] update autoparallel tutorial demo
* add test_ci.sh
* polish
* add conda yaml
* [cli] fixed hostname mismatch error (#2465)
* [example] integrate autoparallel demo with CI (#2466)
* [example] integrate autoparallel demo with CI
* polish code
* polish code
* polish code
* polish code
* [zero] low level optim supports ProcessGroup (#2464)
* [example] update vit ci script (#2469)
* [example] update vit ci script
* [example] update requirements
* [example] update requirements
* [example] integrate seq-parallel tutorial with CI (#2463)
* [zero] polish low level optimizer (#2473)
* polish pp middleware (#2476)
Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>
* [example] update gpt gemini example ci test (#2477)
* [zero] add unit test for low-level zero init (#2474)
* [workflow] fixed the skip condition of example weekly check workflow (#2481)
* [example] stable diffusion add roadmap
* add dummy test_ci.sh
* [example] stable diffusion add roadmap (#2482)
* [CI] add test_ci.sh for palm, opt and gpt (#2475)
* polish code
* [example] titans for gpt
* polish readme
* remove license
* polish code
* update readme
* [example] titans for gpt (#2484)
* [autoparallel] support origin activation ckpt on autoprallel system (#2468)
* [autochunk] support evoformer tracer (#2485)
support full evoformer tracer, which is a main module of alphafold. previously we just support a simplifed version of it.
1. support some evoformer's op in fx
2. support evoformer test
3. add repos for test code
* [example] fix requirements (#2488)
* [zero] add unit testings for hybrid parallelism (#2486)
* [hotfix] gpt example titans bug #2493
* polish code and fix dataloader bugs
* [hotfix] gpt example titans bug #2493 (#2494)
* [fx] allow control of ckpt_codegen init (#2498)
* [fx] allow control of ckpt_codegen init
Currently in ColoGraphModule, ActivationCheckpointCodeGen will be set automatically in __init__. But other codegen can't be set if so.
So I add an arg to control whether to set ActivationCheckpointCodeGen in __init__.
* code style
* [example] dreambooth example
* add test_ci.sh to dreambooth
* [autochunk] support autochunk on evoformer (#2497)
* Revert "Update parallel_context.py (#2408)"
This reverts commit 7d5640b9db.
* add avg partition (#2483)
Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>
* [auto-chunk] support extramsa (#3) (#2504)
* [utils] lazy init. (#2148)
* [utils] lazy init.
* [utils] remove description.
* [utils] complete.
* [utils] finalize.
* [utils] fix names.
* [autochunk] support parsing blocks (#2506)
* [zero] add strict ddp mode (#2508)
* [zero] add strict ddp mode
* [polish] add comments for strict ddp mode
* [zero] fix test error
* [doc] update opt and tutorial links (#2509)
* [workflow] fixed changed file detection (#2515)
Co-authored-by: oahzxl <xuanlei.zhao@gmail.com>
Co-authored-by: eric8607242 <e0928021388@gmail.com>
Co-authored-by: HELSON <c2h214748@gmail.com>
Co-authored-by: Frank Lee <somerlee.9@gmail.com>
Co-authored-by: Haofan Wang <haofanwang.ai@gmail.com>
Co-authored-by: Jiarui Fang <fangjiarui123@gmail.com>
Co-authored-by: ZijianYY <119492445+ZijianYY@users.noreply.github.com>
Co-authored-by: YuliangLiu0306 <72588413+YuliangLiu0306@users.noreply.github.com>
Co-authored-by: Super Daniel <78588128+super-dainiu@users.noreply.github.com>
Co-authored-by: ver217 <lhx0217@gmail.com>
Co-authored-by: Ziyue Jiang <ziyue.jiang97@gmail.com>
Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>
Co-authored-by: oahzxl <43881818+oahzxl@users.noreply.github.com>
Co-authored-by: binmakeswell <binmakeswell@gmail.com>
Co-authored-by: Fazzie-Maqianli <55798671+Fazziekey@users.noreply.github.com>
Co-authored-by: アマデウス <kurisusnowdeng@users.noreply.github.com>
|
2023-01-27 09:52:21 +08:00 |
|
HELSON
|
62c38e3330
|
[zero] polish low level zero optimizer (#2275)
|
2023-01-03 17:22:34 +08:00 |
|
HELSON
|
a7d95b7024
|
[example] add zero1, zero2 example in GPT examples (#2146)
* [example] add zero1 and zero2 for GPT
* update readme in gpt example
* polish code
* change init value
* update readme
|
2022-12-20 14:30:27 +08:00 |
|
HELSON
|
a1ce02d740
|
[zero] test gradient accumulation (#1964)
* [zero] fix memory leak for zero2
* [zero] test gradient accumulation
* [zero] remove grad clip test
|
2022-11-29 13:00:30 +08:00 |
|
HELSON
|
7066dfbf82
|
[zero] fix memory leak for zero2 (#1955)
|
2022-11-16 11:43:24 +08:00 |
|
HELSON
|
6e51d296f0
|
[zero] migrate zero1&2 (#1878)
* add zero1&2 optimizer
* rename test ditectory
* rename test files
* change tolerance in test
|
2022-11-11 09:26:40 +08:00 |
|
ver217
|
c9e8ce67b8
|
fix move fp32 shards (#1604)
|
2022-09-16 17:33:16 +08:00 |
|
ver217
|
ce470ba37e
|
[checkpoint] sharded optim save/load grad scaler (#1350)
|
2022-07-21 15:21:21 +08:00 |
|
ver217
|
a45ddf2d5f
|
[hotfix] fix sharded optim step and clip_grad_norm (#1226)
|
2022-07-08 13:34:48 +08:00 |
|
ver217
|
9e1daa63d2
|
[zero] sharded optim supports loading local state dict (#1170)
* sharded optim supports loading local state dict
* polish code
* add unit test
|
2022-06-24 18:05:16 +08:00 |
|
ver217
|
6690a61b4d
|
[hotfix] prevent nested ZeRO (#1140)
|
2022-06-21 11:33:53 +08:00 |
|
ver217
|
c4d903e64a
|
[gemini] accelerate adjust_layout() (#878)
* add lru cache
* polish code
* update unit test
* fix sharded optim
|
2022-04-26 18:08:31 +08:00 |
|
ver217
|
d7e0303d1e
|
[zero] use GeminiMemoryManager when sampling model data (#850)
|
2022-04-24 17:17:22 +08:00 |
|
HELSON
|
e5ea3fdeef
|
[gemini] add GeminiMemoryManger (#832)
* refactor StatefulTensor, tensor utilities
* add unitest for GeminiMemoryManager
|
2022-04-24 13:08:48 +08:00 |
|
Jiarui Fang
|
61c20b44bc
|
[log] local throughput metrics (#811)
* Revert "[zero] add ZeroTensorShardStrategy (#793)"
This reverts commit 88759e289e.
* [gemini] set cpu memory capacity
* [log] local throughput collecting
* polish
* polish
* polish
* polish code
* polish
|
2022-04-20 10:05:39 +08:00 |
|
Jiarui Fang
|
4d9332b4c5
|
[refactor] moving memtracer to gemini (#801)
|
2022-04-19 10:13:08 +08:00 |
|
Jiarui Fang
|
8711c706f4
|
[hotfix] fix grad offload when enabling reuse_fp16_shard
|
2022-04-18 14:58:21 +08:00 |
|
ver217
|
f1fa1a675f
|
fix grad offload when enabling reuse_fp16_shard
|
2022-04-18 14:07:39 +08:00 |
|
HELSON
|
4c4388c46e
|
[hotfix] fix memory leak in zero (#781)
|
2022-04-18 13:57:03 +08:00 |
|
ver217
|
6e553748a7
|
polish sharded optim docstr and warning (#770)
|
2022-04-14 21:03:59 +08:00 |
|
Jiarui Fang
|
10ef8afdd2
|
[gemini] init genimi individual directory (#754)
|
2022-04-14 16:40:26 +08:00 |
|
ver217
|
4b048a8728
|
fix prepare grads in sharded optim (#749)
|
2022-04-13 22:36:11 +08:00 |
|
ver217
|
e396bb71f2
|
[zero] add tensor placement policies (#743)
* add tensor placement policies
* polish comments
* polish comments
* update moe unit tests
|
2022-04-13 15:00:48 +08:00 |
|
HELSON
|
22c4b88d56
|
[zero] refactor ShardedParamV2 for convenience (#742)
|
2022-04-13 14:54:26 +08:00 |
|
Jiarui Fang
|
4d90a7b513
|
[refactor] zero directory (#724)
|
2022-04-11 23:13:02 +08:00 |
|
HELSON
|
dbd96fe90a
|
[zero] check whether gradients have inf and nan in gpu (#712)
|
2022-04-11 15:40:13 +08:00 |
|
HELSON
|
a9b8300d54
|
[zero] improve adaptability for not-shard parameters (#708)
* adapt post grad hooks for not-shard parameters
* adapt optimizer for not-shard parameters
* offload gradients for not-replicated parameters
|
2022-04-11 13:38:51 +08:00 |
|
HELSON
|
ee112fe1da
|
[zero] adapt zero hooks for unsharded module (#699)
|
2022-04-08 20:23:26 +08:00 |
|
ver217
|
3c9cd5bb5e
|
[zero] stateful tensor manager (#687)
* [WIP] stateful tensor manager
* add eviction strategy
* polish code
* polish code
* polish comment
* add unit test
* fix sampler bug
* polish code
* fix max sampling cnt resetting bug
* fix sampler bug
* polish code
* fix bug
* fix unit test
Co-authored-by: jiaruifang <fangjiarui123@gmail.com>
|
2022-04-08 17:51:34 +08:00 |
|
HELSON
|
17e73e62cc
|
[hotfix] fix bugs for unsharded parameters when restore data (#664)
|
2022-04-03 22:02:11 +08:00 |
|
Jiarui Fang
|
0aab52301e
|
[hotfix] fix a bug in model data stats tracing (#655)
|
2022-04-03 21:48:06 +08:00 |
|
HELSON
|
055fbf5be6
|
[zero] adapt zero for unsharded paramters (Optimizer part) (#601)
|
2022-04-01 20:10:47 +08:00 |
|
ver217
|
0ef8819c67
|
polish docstring of zero (#612)
|
2022-04-01 14:50:56 +08:00 |
|
ver217
|
9bee119104
|
[hotfix] fix sharded optim zero grad (#604)
* fix sharded optim zero grad
* polish comments
|
2022-04-01 12:41:20 +08:00 |
|
Jiarui Fang
|
e956d93ac2
|
[refactor] memory utils (#577)
|
2022-04-01 09:22:33 +08:00 |
|
ver217
|
7c6c427db1
|
[zero] trace states of fp16/32 grad and fp32 param (#571)
|
2022-03-31 16:26:54 +08:00 |
|
Jiarui Fang
|
7675366fce
|
[polish] rename col_attr -> colo_attr (#558)
|
2022-03-31 12:25:45 +08:00 |
|
ver217
|
014bac0c49
|
[zero] hijack p.grad in sharded model (#554)
* hijack p.grad in sharded model
* polish comments
* polish comments
|
2022-03-30 18:14:50 +08:00 |
|
Jiarui Fang
|
f552b11294
|
[zero] label state for param fp16 and grad (#551)
|
2022-03-30 15:57:46 +08:00 |
|
Jiarui Fang
|
107b99ddb1
|
[zero] dump memory stats for sharded model (#548)
|
2022-03-30 09:38:44 +08:00 |
|
Jiarui Fang
|
53b1b6e340
|
[zero] non model data tracing (#545)
|
2022-03-29 15:45:48 +08:00 |
|
ver217
|
fb841dd5c5
|
[zero] optimize grad offload (#539)
* optimize grad offload
* polish code
* polish code
|
2022-03-29 12:48:00 +08:00 |
|
Jiarui Fang
|
c11ff81b15
|
[zero] get memory usage of sharded optim v2. (#542)
|
2022-03-29 09:08:18 +08:00 |
|
Jiarui Fang
|
705f56107c
|
[zero] refactor model data tracing (#537)
|
2022-03-28 16:38:18 +08:00 |
|
Jiarui Fang
|
05e33b2578
|
[zero] fix grad offload (#528)
* [zero] fix grad offload
* polish code
|
2022-03-25 18:23:25 +08:00 |
|
Jiarui Fang
|
4d322b79da
|
[refactor] remove old zero code (#517)
|
2022-03-25 14:54:39 +08:00 |
|
Jiarui Fang
|
bca0c49a9d
|
[zero] use colo model data api in optimv2 (#511)
|
2022-03-24 17:19:34 +08:00 |
|
Jiarui Fang
|
0035b7be07
|
[memory] add model data tensor moving api (#503)
|
2022-03-24 14:29:41 +08:00 |
|
ver217
|
9ec1ce6ab1
|
[zero] sharded model support the reuse of fp16 shard (#495)
* sharded model supports reuse fp16 shard
* rename variable
* polish code
* polish code
* polish code
|
2022-03-23 14:59:59 +08:00 |
|
ver217
|
a9ecb4b244
|
[zero] polish sharded optimizer v2 (#490)
|
2022-03-22 15:53:48 +08:00 |
|