Boyuan Yao
7a58dc5ad2
Update metainfo patch branch ( #2517 )
...
* init
* rename and remove useless func
* basic chunk
* add evoformer
* align evoformer
* add meta
* basic chunk
* basic memory
* finish basic inference memory estimation
* finish memory estimation
* fix bug
* finish memory estimation
* add part of index tracer
* finish basic index tracer
* add doc string
* add doc str
* polish code
* polish code
* update active log
* polish code
* add possible region search
* finish region search loop
* finish chunk define
* support new op
* rename index tracer
* finishi codegen on msa
* redesign index tracer, add source and change compute
* pass outproduct mean
* code format
* code format
* work with outerproductmean and msa
* code style
* code style
* code style
* code style
* change threshold
* support check_index_duplicate
* support index dupilictae and update loop
* support output
* update memory estimate
* optimise search
* fix layernorm
* move flow tracer
* refactor flow tracer
* format code
* refactor flow search
* code style
* adapt codegen to prepose node
* code style
* remove abandoned function
* remove flow tracer
* code style
* code style
* reorder nodes
* finish node reorder
* update run
* code style
* add chunk select class
* add chunk select
* code style
* add chunksize in emit, fix bug in reassgin shape
* code style
* turn off print mem
* add evoformer openfold init
* init openfold
* add benchmark
* add print
* code style
* code style
* init openfold
* update openfold
* align openfold
* use max_mem to control stratge
* update source add
* add reorder in mem estimator
* improve reorder efficeincy
* support ones_like, add prompt if fit mode search fail
* fix a bug in ones like, dont gen chunk if dim size is 1
* fix bug again
* update min memory stratege, reduce mem usage by 30%
* last version of benchmark
* refactor structure
* restruct dir
* update test
* rename
* take apart chunk code gen
* close mem and code print
* code format
* rename ambiguous variable
* seperate flow tracer
* seperate input node dim search
* seperate prepose_nodes
* seperate non chunk input
* seperate reorder
* rename
* ad reorder graph
* seperate trace flow
* code style
* code style
* fix typo
* set benchmark
* rename test
* update codegen test
* Fix state_dict key missing issue of the ZeroDDP (#2363 )
* Fix state_dict output for ZeroDDP duplicated parameters
* Rewrite state_dict based on get_static_torch_model
* Modify get_static_torch_model to be compatible with the lower version (ZeroDDP)
* update codegen test
* update codegen test
* add chunk search test
* code style
* add available
* [hotfix] fix gpt gemini example (#2404 )
* [hotfix] fix gpt gemini example
* [example] add new assertions
* remove autochunk_available
* [workflow] added nightly release to pypi (#2403 )
* add comments
* code style
* add doc for search chunk
* [doc] updated readme regarding pypi installation (#2406 )
* add doc for search
* [doc] updated kernel-related optimisers' docstring (#2385 )
* [doc] updated kernel-related optimisers' docstring
* polish doc
* rename trace_index to trace_indice
* rename function from index to indice
* rename
* rename in doc
* [polish] polish code for get_static_torch_model (#2405 )
* [gemini] polish code
* [testing] remove code
* [gemini] make more robust
* rename
* rename
* remove useless function
* [worfklow] added coverage test (#2399 )
* [worfklow] added coverage test
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* add doc for trace indice
* [docker] updated Dockerfile and release workflow (#2410 )
* add doc
* update doc
* add available
* change imports
* add test in import
* [workflow] refactored the example check workflow (#2411 )
* [workflow] refactored the example check workflow
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* Update parallel_context.py (#2408 )
* [hotfix] add DISTPAN argument for benchmark (#2412 )
* change the benchmark config file
* change config
* revert config file
* rename distpan to distplan
* [workflow] added precommit check for code consistency (#2401 )
* [workflow] added precommit check for code consistency
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* polish code
* adapt new fx
* [workflow] added translation for non-english comments (#2414 )
* [setup] refactored setup.py for dependency graph (#2413 )
* change import
* update doc
* [workflow] auto comment if precommit check fails (#2417 )
* [hotfix] add norm clearing for the overflow step (#2416 )
* [examples] adding tflops to PaLM (#2365 )
* [workflow]auto comment with test coverage report (#2419 )
* [workflow]auto comment with test coverage report
* polish code
* polish yaml
* [doc] added documentation for CI/CD (#2420 )
* [doc] added documentation for CI/CD
* polish markdown
* polish markdown
* polish markdown
* [example] removed duplicated stable diffusion example (#2424 )
* [zero] add inference mode and its unit test (#2418 )
* [workflow] report test coverage even if below threshold (#2431 )
* [example] improved the clarity yof the example readme (#2427 )
* [example] improved the clarity yof the example readme
* polish workflow
* polish workflow
* polish workflow
* polish workflow
* polish workflow
* polish workflow
* [ddp] add is_ddp_ignored (#2434 )
[ddp] rename to is_ddp_ignored
* [workflow] make test coverage report collapsable (#2436 )
* [autoparallel] add shard option (#2423 )
* [fx] allow native ckpt trace and codegen. (#2438 )
* [cli] provided more details if colossalai run fail (#2442 )
* [autoparallel] integrate device mesh initialization into autoparallelize (#2393 )
* [autoparallel] integrate device mesh initialization into autoparallelize
* add megatron solution
* update gpt autoparallel examples with latest api
* adapt beta value to fit the current computation cost
* [zero] fix state_dict and load_state_dict for ddp ignored parameters (#2443 )
* [ddp] add is_ddp_ignored
[ddp] rename to is_ddp_ignored
* [zero] fix state_dict and load_state_dict
* fix bugs
* [zero] update unit test for ZeroDDP
* [example] updated the hybrid parallel tutorial (#2444 )
* [example] updated the hybrid parallel tutorial
* polish code
* [zero] add warning for ignored parameters (#2446 )
* [example] updated large-batch optimizer tutorial (#2448 )
* [example] updated large-batch optimizer tutorial
* polish code
* polish code
* [example] fixed seed error in train_dreambooth_colossalai.py (#2445 )
* [workflow] fixed the on-merge condition check (#2452 )
* [workflow] automated the compatiblity test (#2453 )
* [workflow] automated the compatiblity test
* polish code
* [autoparallel] update binary elementwise handler (#2451 )
* [autoparallel] update binary elementwise handler
* polish
* [workflow] automated bdist wheel build (#2459 )
* [workflow] automated bdist wheel build
* polish workflow
* polish readme
* polish readme
* Fix False warning in initialize.py (#2456 )
* Update initialize.py
* pre-commit run check
* [examples] update autoparallel tutorial demo (#2449 )
* [examples] update autoparallel tutorial demo
* add test_ci.sh
* polish
* add conda yaml
* [cli] fixed hostname mismatch error (#2465 )
* [example] integrate autoparallel demo with CI (#2466 )
* [example] integrate autoparallel demo with CI
* polish code
* polish code
* polish code
* polish code
* [zero] low level optim supports ProcessGroup (#2464 )
* [example] update vit ci script (#2469 )
* [example] update vit ci script
* [example] update requirements
* [example] update requirements
* [example] integrate seq-parallel tutorial with CI (#2463 )
* [zero] polish low level optimizer (#2473 )
* polish pp middleware (#2476 )
Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>
* [example] update gpt gemini example ci test (#2477 )
* [zero] add unit test for low-level zero init (#2474 )
* [workflow] fixed the skip condition of example weekly check workflow (#2481 )
* [example] stable diffusion add roadmap
* add dummy test_ci.sh
* [example] stable diffusion add roadmap (#2482 )
* [CI] add test_ci.sh for palm, opt and gpt (#2475 )
* polish code
* [example] titans for gpt
* polish readme
* remove license
* polish code
* update readme
* [example] titans for gpt (#2484 )
* [autoparallel] support origin activation ckpt on autoprallel system (#2468 )
* [autochunk] support evoformer tracer (#2485 )
support full evoformer tracer, which is a main module of alphafold. previously we just support a simplifed version of it.
1. support some evoformer's op in fx
2. support evoformer test
3. add repos for test code
* [example] fix requirements (#2488 )
* [zero] add unit testings for hybrid parallelism (#2486 )
* [hotfix] gpt example titans bug #2493
* polish code and fix dataloader bugs
* [hotfix] gpt example titans bug #2493 (#2494 )
* [fx] allow control of ckpt_codegen init (#2498 )
* [fx] allow control of ckpt_codegen init
Currently in ColoGraphModule, ActivationCheckpointCodeGen will be set automatically in __init__. But other codegen can't be set if so.
So I add an arg to control whether to set ActivationCheckpointCodeGen in __init__.
* code style
* [example] dreambooth example
* add test_ci.sh to dreambooth
* [autochunk] support autochunk on evoformer (#2497 )
* Revert "Update parallel_context.py (#2408 )"
This reverts commit 7d5640b9db#2483 )
Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>
* [auto-chunk] support extramsa (#3 ) (#2504 )
* [utils] lazy init. (#2148 )
* [utils] lazy init.
* [utils] remove description.
* [utils] complete.
* [utils] finalize.
* [utils] fix names.
* [autochunk] support parsing blocks (#2506 )
* [zero] add strict ddp mode (#2508 )
* [zero] add strict ddp mode
* [polish] add comments for strict ddp mode
* [zero] fix test error
* [doc] update opt and tutorial links (#2509 )
* [workflow] fixed changed file detection (#2515 )
Co-authored-by: oahzxl <xuanlei.zhao@gmail.com>
Co-authored-by: eric8607242 <e0928021388@gmail.com>
Co-authored-by: HELSON <c2h214748@gmail.com>
Co-authored-by: Frank Lee <somerlee.9@gmail.com>
Co-authored-by: Haofan Wang <haofanwang.ai@gmail.com>
Co-authored-by: Jiarui Fang <fangjiarui123@gmail.com>
Co-authored-by: ZijianYY <119492445+ZijianYY@users.noreply.github.com>
Co-authored-by: YuliangLiu0306 <72588413+YuliangLiu0306@users.noreply.github.com>
Co-authored-by: Super Daniel <78588128+super-dainiu@users.noreply.github.com>
Co-authored-by: ver217 <lhx0217@gmail.com>
Co-authored-by: Ziyue Jiang <ziyue.jiang97@gmail.com>
Co-authored-by: Ziyue Jiang <ziyue.jiang@gmail.com>
Co-authored-by: oahzxl <43881818+oahzxl@users.noreply.github.com>
Co-authored-by: binmakeswell <binmakeswell@gmail.com>
Co-authored-by: Fazzie-Maqianli <55798671+Fazziekey@users.noreply.github.com>
Co-authored-by: アマデウス <kurisusnowdeng@users.noreply.github.com>
2023-01-27 09:52:21 +08:00
HELSON
62c38e3330
[zero] polish low level zero optimizer ( #2275 )
2023-01-03 17:22:34 +08:00
HELSON
a7d95b7024
[example] add zero1, zero2 example in GPT examples ( #2146 )
...
* [example] add zero1 and zero2 for GPT
* update readme in gpt example
* polish code
* change init value
* update readme
2022-12-20 14:30:27 +08:00
Jiarui Fang
c89c66a858
[Gemini] update API of the chunkmemstatscollector. ( #2129 )
2022-12-14 00:47:06 +08:00
Jiarui Fang
2938edf446
[Gemini] update the non model data record method in runtime memory tracer ( #2128 )
2022-12-13 17:11:31 +08:00
Jiarui Fang
e99edfcb51
[NFC] polish comments for Chunk class ( #2116 )
2022-12-12 15:39:31 +08:00
Jiarui Fang
33f4412102
[Gemini] use MemStats to store the tracing data. Seperate it from Collector. ( #2084 )
2022-12-06 16:43:06 +08:00
Jiarui Fang
b3b89865e2
[Gemini] ParamOpHook -> ColoParamOpHook ( #2080 )
2022-12-05 17:11:06 +08:00
HELSON
a1ce02d740
[zero] test gradient accumulation ( #1964 )
...
* [zero] fix memory leak for zero2
* [zero] test gradient accumulation
* [zero] remove grad clip test
2022-11-29 13:00:30 +08:00
Jiarui Fang
cc0ed7cf33
[Gemini] ZeROHookV2 -> GeminiZeROHook ( #1972 )
2022-11-17 14:43:49 +08:00
Jiarui Fang
c4739a725a
[Gemini] polish memstats collector ( #1962 )
2022-11-16 15:45:57 +08:00
Jiarui Fang
f7e276fa71
[Gemini] add GeminiAdamOptimizer ( #1960 )
2022-11-16 14:44:28 +08:00
HELSON
7066dfbf82
[zero] fix memory leak for zero2 ( #1955 )
2022-11-16 11:43:24 +08:00
HELSON
6e51d296f0
[zero] migrate zero1&2 ( #1878 )
...
* add zero1&2 optimizer
* rename test ditectory
* rename test files
* change tolerance in test
2022-11-11 09:26:40 +08:00
Zihao
20e255d4e8
MemStatsCollectorStatic ( #1765 )
2022-11-07 16:49:03 +08:00
HELSON
c6a1a62636
[hotfix] fix zero's incompatibility with checkpoint in torch-1.12 ( #1786 )
...
* [hotfix] fix zero's incompatibility with checkpoint in torch-1.12
* [zero] add cpu shard init
* [zero] add tiny example test
* [colo_tensor] fix bugs for torch-1.11
2022-11-02 16:11:34 +08:00
CsRic
ea961d8fd1
[NFC] polish colossalai/zero/sharded_param/__init__.py code style ( #1717 )
...
Co-authored-by: ric <mkkt_bkkt@mail.ustc.edu.cn>
2022-10-19 12:20:51 +08:00
HELSON
1468e4bcfc
[zero] add constant placement policy ( #1705 )
...
* fixes memory leak when paramter is in fp16 in ZeroDDP init.
* bans chunk releasement in CUDA. Only when a chunk is about to offload, it is allowed to release.
* adds a constant placement policy. With it, users can allocate a reserved caching memory space for parameters.
2022-10-14 17:53:16 +08:00
HELSON
b28991dd0a
[feature] A new ZeRO implementation ( #1644 )
2022-10-09 09:18:51 +08:00
Jiarui Fang
c5d39215f6
Revert "[feature] new zero implementation ( #1623 )" ( #1643 )
...
This reverts commit 5be118f405
2022-09-26 10:06:03 +08:00
HELSON
5be118f405
[feature] new zero implementation ( #1623 )
2022-09-24 19:58:18 +08:00
HELSON
f7f2248771
[moe] fix MoE bugs ( #1628 )
...
* remove forced FP32 modules
* correct no_shard-contexts' positions
2022-09-22 13:56:30 +08:00
ver217
c9e8ce67b8
fix move fp32 shards ( #1604 )
2022-09-16 17:33:16 +08:00
Fazzie-Maqianli
06dccdde44
[NFC] polish colossalai/zero/sharded_model/reduce_scatter.py code style ( #1554 )
2022-09-08 22:11:04 +08:00
ver217
821c6172e2
[utils] Impl clip_grad_norm for ColoTensor and ZeroOptimizer ( #1442 )
2022-08-11 22:58:58 +08:00
ver217
6df3e19be9
[hotfix] zero optim prevents calling inner optim.zero_grad ( #1422 )
2022-08-09 16:08:12 +08:00
ver217
8dced41ad0
[zero] zero optim state_dict takes only_rank_0 ( #1384 )
...
* zero optim state_dict takes only_rank_0
* fix unit test
2022-07-29 13:22:50 +08:00
ver217
828b9e5e0d
[hotfix] fix zero optim save/load state dict ( #1381 )
2022-07-28 17:19:39 +08:00
ver217
6b43c789fd
fix zero optim backward_by_grad and save/load ( #1353 )
2022-07-21 16:43:58 +08:00
ver217
d068af81a3
[doc] update rst and docstring ( #1351 )
...
* update rst
* add zero docstr
* fix docstr
* remove fx.tracer.meta_patch
* fix docstr
* fix docstr
* update fx rst
* fix fx docstr
* remove useless rst
2022-07-21 15:54:53 +08:00
ver217
ce470ba37e
[checkpoint] sharded optim save/load grad scaler ( #1350 )
2022-07-21 15:21:21 +08:00
ver217
7a05367101
[hotfix] shared model returns cpu state_dict ( #1328 )
2022-07-15 22:11:37 +08:00
Jiarui Fang
4165eabb1e
[hotfix] remove potiential circle import ( #1307 )
...
* make it faster
* [hotfix] remove circle import
2022-07-14 13:44:26 +08:00
ver217
a45ddf2d5f
[hotfix] fix sharded optim step and clip_grad_norm ( #1226 )
2022-07-08 13:34:48 +08:00
Jiarui Fang
a444633d13
warmup ratio configration ( #1192 )
2022-06-30 15:23:50 +08:00
Jiarui Fang
372f791444
[refactor] move chunk and chunkmgr to directory gemini ( #1182 )
2022-06-29 13:31:02 +08:00
ver217
9e1daa63d2
[zero] sharded optim supports loading local state dict ( #1170 )
...
* sharded optim supports loading local state dict
* polish code
* add unit test
2022-06-24 18:05:16 +08:00
ver217
561e90493f
[zero] zero optim supports loading local state dict ( #1171 )
...
* zero optim supports loading local state dict
* polish code
* add unit test
2022-06-24 17:25:57 +08:00
ver217
8106d7b8c7
[ddp] refactor ColoDDP and ZeroDDP ( #1146 )
...
* ColoDDP supports overwriting default process group
* rename ColoDDPV2 to ZeroDDP
* add docstr for ZeroDDP
* polish docstr
2022-06-21 16:35:23 +08:00
ver217
6690a61b4d
[hotfix] prevent nested ZeRO ( #1140 )
2022-06-21 11:33:53 +08:00
Frank Lee
15aab1476e
[zero] avoid zero hook spam by changing log to debug level ( #1137 )
2022-06-21 10:44:01 +08:00
ver217
a1a7899cae
[hotfix] fix zero init ctx numel ( #1128 )
2022-06-16 17:17:27 +08:00
ver217
f0a954f16d
[ddp] add set_params_to_ignore for ColoDDP ( #1122 )
...
* add set_params_to_ignore for ColoDDP
* polish code
* fix zero hook v2
* add unit test
* polish docstr
2022-06-16 12:54:46 +08:00
Frank Lee
14e5b11d7f
[zero] fixed api consistency ( #1098 )
2022-06-10 16:59:59 +08:00
Frank Lee
cb18922c47
[doc] added documentation to chunk and chunk manager ( #1094 )
...
* [doc] added documentation to chunk and chunk manager
* polish code
* polish code
* polish code
2022-06-10 15:33:06 +08:00
ver217
1f894e033f
[gemini] zero supports gemini ( #1093 )
...
* add placement policy
* add gemini mgr
* update mem stats collector
* update zero
* update zero optim
* fix bugs
* zero optim monitor os
* polish unit test
* polish unit test
* add assert
2022-06-10 14:48:28 +08:00
ver217
be01db37c8
[tensor] refactor chunk mgr and impl MemStatsCollectorV2 ( #1077 )
...
* polish chunk manager
* polish unit test
* impl add_extern_static_tensor for chunk mgr
* add mem stats collector v2
* polish code
* polish unit test
* polish code
* polish get chunks
2022-06-09 20:56:34 +08:00
ver217
c5cd3b0f35
[zero] zero optim copy chunk rather than copy tensor ( #1070 )
2022-06-07 10:30:46 +08:00
Jiarui Fang
49832b2344
[refactory] add nn.parallel module ( #1068 )
2022-06-06 15:34:41 +08:00
ver217
e3fde4ee6b
fix import error in sharded model v2 ( #1053 )
2022-06-02 13:48:22 +08:00
